Yue Liu

TL;DR: The updated agriGO that has a largely expanded number of supporting species and datatypes and more visualization features were added to the platform, including SEACOMPARE, direct acyclic graph (DAG) and Scatter Plots, which can be merged by choosing any significant GO term.

TL;DR: A PCSD database integrated the identified chromatin states with epigenetic features and may be beneficial for communities to discover causal functions hidden in plant chromatin.

TL;DR: The results suggest that changes in gene copy number are one of the important sources of genetic diversity and some of these changes could be directly associated with important traits in crops.

TL;DR: The identification of Ms2 not only unravels the genetic basis of a historically important breeding trait, but also shows an example of how a TRIM element insertion near a gene can contribute to genetic novelty and phenotypic plasticity.

TL;DR: Through integration of the available apple genomic, transcriptomic, and epigenomic datasets, co-expression networks, identified functional modules, and predicted chromatin states are constructed, which showed that the function of many modules was related to development, secondary metabolism, hormone response, and transcriptional regulation.