Journal ArticleDOI
Quantitative analysis of x-ray absorption near edge structure data by a full multiple scattering procedure: the Fe-CO geometry in photolyzed carbonmonoxy-myoglobin single crystal.
TLDR
The first quantitative analysis of the Fe K-edge polarized x-ray absorption near edge structure of the iron protein carbonmonoxy-myoglobin single crystal and of its cryogenic photoproduct Mb(*)CO is reported.Abstract:
We report the first quantitative analysis of the Fe K-edge polarized x-ray absorption near edge structure of the iron protein carbonmonoxy-myoglobin (MbCO) single crystal and of its cryogenic photoproduct ${\mathrm{Mb}}^{*}\mathrm{CO}$. The CO-Fe-heme local structure has been determined using a novel fitting procedure based on the full multiple scattering approach. The extracted local structure of ${\mathrm{Mb}}^{*}\mathrm{CO}$ includes a Fe-CO distance of $(3.08\ifmmode\pm\else\textpm\fi{}0.07)\phantom{\rule{0ex}{0ex}}\AA{}$, with a tilting angle between the heme normal and the Fe-C vector of $(37\ifmmode\pm\else\textpm\fi{}7)\ifmmode^\circ\else\textdegree\fi{}$, and a bending angle between the Fe-C vector and the C-O bond of $(31\ifmmode\pm\else\textpm\fi{}5)\ifmmode^\circ\else\textdegree\fi{}$.read more
Citations
More filters
Journal ArticleDOI
Single-reference ab initio methods for the calculation of excited states of large molecules.
Andreas Dreuw,Martin Head-Gordon +1 more
Journal ArticleDOI
Reactivity of Surface Species in Heterogeneous Catalysts Probed by In Situ X-ray Absorption Techniques
TL;DR: (Article begins on next page)
Journal ArticleDOI
X-ray absorption spectroscopy to analyze nuclear geometry and electronic structure of biological metal centers—potential and questions examined with special focus on the tetra-nuclear manganese complex of oxygenic photosynthesis
TL;DR: The potential of modern XANES theory is demonstrated by presenting first simulations of the dichroism in the XANes spectra of the PSII manganese complex.
Journal ArticleDOI
Time-dependent density functional calculations of ligand K-edge X-ray absorption spectra
TL;DR: In this article, a TD-DFT-based protocol was used to simulate the Cl K-edge spectra of a series of metal tetrachloride complexes and the influence of the chosen density functional, relativistics, basis set, and solvation has been systematically investigated, showing that good agreement between the calculated spectra and the relative experimental energies and intensities can be achieved by using the BP86 functional with standard polarized triple-ζ basis sets (such as the TZVP basis of Ahlrichs and co-workers).
Journal ArticleDOI
Supervised Machine-Learning-Based Determination of Three-Dimensional Structure of Metallic Nanoparticles
TL;DR: The use of X-ray absorption near-edge structure (XANES) spectroscopy and supervised machine learning (SML) for refining the 3D geometry of metal catalysts is reported on, allowing one to solve the structure of a metal catalyst from its experimental XANES.
Related Papers (5)
Geometrical fitting of experimental XANES spectra by a full multiple-scattering procedure.
Maurizio Benfatto,S. Della Longa +1 more