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Journal ArticleDOI

The stable states picture of chemical reactions. II. Rate constants for condensed and gas phase reaction models

Richard F. Grote, +1 more
- 15 Sep 1980 - 
- Vol. 73, Iss: 6, pp 2715-2732
TLDR
In this paper, the stable states picture (SSP) was used to derive the time correlation function (tcf) for the rate constant κ for a wide variety of gas and solution phase reaction models.
Abstract
The time correlation function (tcf) formulas for rate constants κ derived via the stable states picture (SSP) of chemical reactions are applied to a wide variety (a–d) of gas and solution phase reactionmodels. (a) For gas phase bimolecular reactions, we show that the flux tcf governing κ corresponds to standard numerical trajectory calculation methods. Alternate formulas for κ are derived which focus on saddle point surfaces, thus increasing computational efficiency. Advantages of the SSP formulas for κ are discussed. (b) For gas phase unimolecular reactions, simple results for κ are found in both the strong and weak coupling collision limits; the often ignored role of product stabilization is exposed for reversible isomerizations. The SSP results correct some standard weak coupling rate constant results by as much as 50%. (c) For barrier crossing reactions in solution, we evaluate κ for a generalized (non‐Markovian) Langevin description of the dynamics. For several realistic models of time dependent friction, κ differs dramatically from the popular Kramers constant friction predictions; this has important implications for the validity of transition state theory. (d) For solutionreactions heavily influenced by spatial diffusion, we show that the SSP isolates short range reaction dynamics of interest and includes important barrier region effects in structural isomerizations often missed in standard descriptions.

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Citations
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Journal ArticleDOI

Do Dynamic Effects Play a Significant Role in Enzymatic Catalysis? A Theoretical Analysis of Formate Dehydrogenase

TL;DR: Application of Grote-Hynes theory has allowed the identification of the modes responsible for the substrate-environment coupling, showing how some protein motions take place simultaneously with the reaction, and an overestimation of the catalyzed rate constant.
Journal ArticleDOI

Self-organized electron transfer

L. Pohlmann, +1 more
- 01 Jan 1997 - 
TL;DR: In this paper, a self-organized electron transfer mechanism was proposed, where phonon assisted autocatalytic energy input leads to a dissipative activated complex, and the problem is theoretically treated as a Kramers approach, a Brownian motion in a non-uniform force field.
Journal ArticleDOI

Memory kernel in liquid phase cis–trans isomerization

TL;DR: In this article, the memory kernel in liquid phase cis-trans isomerization was examined from the point of view of existing experimental data as well as MD simulations, and it was found that the angular velocity distribution for the isomerizing molecule may be strongly influenced by shape effects, caused by actual molecular differences between the cis and trans configurations.
Journal ArticleDOI

Parametrizing linear generalized Langevin dynamics from explicit molecular dynamics simulations.

TL;DR: In this article, a Fourier-based parametrization method was developed for the frequency domain, which outperforms its time-domain analogues, unless the system under study consists of a harmonic bath bi-linearly coupled to the relevant degrees of freedom.
Journal ArticleDOI

What is the solvent longitudinal time scale controlling electron transfer rates

TL;DR: In this article, a theory for electron transfer rates in polar solvents is developed using an expansion of the density matrix in Liouville space and utilizing the analogy with the problem of nonlinear optical line shapes.
References
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Journal ArticleDOI

Brownian motion in a field of force and the diffusion model of chemical reactions

TL;DR: In this article, a particle which is caught in a potential hole and which, through the shuttling action of Brownian motion, can escape over a potential barrier yields a suitable model for elucidating the applicability of the transition state method for calculating the rate of chemical reactions.
Book

Theory of Unimolecular Reactions

W. Forst, +1 more
BookDOI

Dynamics of Molecular Collisions

TL;DR: In this paper, the potential energy surfaces and their effect on collision processes are discussed. But the authors focus on the nonadiabatic processes in collision theory and not on the classical trajectories of trajectories.
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