Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

The influence of diet on the distribution of nitrogen isotopes in animals was investigated by analyzing animals grown in the laboratory on diets of constant nitrogen isotopic composition. 
The isotopic composition of the nitrogen in an animal reflects the nitrogen isotopic composition of its diet. The δ^(15)N values of the whole bodies of animals are usually more positive than those of their diets. Different individuals of a species raised on the same diet can have significantly different δ^(15)N values. The variability of the relationship between the δ^(15)N values of animals and their diets is greater for different species raised on the same diet than for the same species raised on different diets. Different tissues of mice are also enriched in ^(15)N relative to the diet, with the difference between the δ^(15)N values of a tissue and the diet depending on both the kind of tissue and the diet involved. The δ^(15)N values of collagen and chitin, biochemical components that are often preserved in fossil animal remains, are also related to the δ^(15)N value of the diet. 
The dependence of the δ^(15)N values of whole animals and their tissues and biochemical components on the δ^(15)N value of diet indicates that the isotopic composition of animal nitrogen can be used to obtain information about an animal's diet if its potential food sources had different δ^(15)N values. The nitrogen isotopic method of dietary analysis probably can be used to estimate the relative use of legumes vs non-legumes or of aquatic vs terrestrial organisms as food sources for extant and fossil animals. However, the method probably will not be applicable in those modern ecosystems in which the use of chemical fertilizers has influenced the distribution of nitrogen isotopes in food sources. 
The isotopic method of dietary analysis was used to reconstruct changes in the diet of the human population that occupied the Tehuacan Valley of Mexico over a 7000 yr span. Variations in the δ^(15)C and δ^(15)N values of bone collagen suggest that C_4 and/or CAM plants (presumably mostly corn) and legumes (presumably mostly beans) were introduced into the diet much earlier than suggested by conventional archaeological analysis.

Influence of Diet On the Distribtion of Nitrogen Isotopes in Animals

I. the origin of species by means of natural selection

Carbonate communities: The activity of anaerobic methane oxidizing microbes facilitates precipitation of vast quantities of authigenic carbonate at methane seeps. Here we demonstrate the significant role of carbonate rocks in promoting diversity by providing unique habitat and food resources for macrofaunal assemblages at seeps on the Costa Rica margin (400–1850 m). The attendant fauna is surprisingly similar to that in rocky intertidal shores, with numerous grazing gastropods (limpets and snails) as dominant taxa. However, the community feeds upon seep-associated microbes. Macrofaunal density, composition, and diversity on carbonates vary as a function of seepage activity, biogenic habitat and location. The macrofaunal community of carbonates at non-seeping (inactive) sites is strongly related to the hydrography (depth, temperature, O2) of overlying water, whereas the fauna at sites of active seepage is not. Densities are highest on active rocks from tubeworm bushes and mussel beds, particularly at the Mound 12 location (1000 m). Species diversity is higher on rocks exposed to active seepage, with multiple species of gastropods and polychaetes dominant, while crustaceans, cnidarians, and ophiuroids were better represented on rocks at inactive sites. Macro-infauna (larger than 0.3 mm) from tube cores taken in nearby seep sediments at comparable depths exhibited densities similar to those on carbonate rocks, but had lower diversity and different taxonomic composition. Seep sediments had higher densities of ampharetid, dorvilleid, hesionid, cirratulid and lacydoniid polychaetes, whereas carbonates had more gastropods, as well as syllid, chrysopetalid and polynoid polychaetes. Stable isotope signatures and metrics: The stable isotope signatures of carbonates were heterogeneous, as were the food sources and nutrition used by the animals. Carbonate δ13Cinorg values (mean = -26.98‰) ranged from -53.3‰ to +10.0‰, and were significantly heavier than carbonate δ13Corg (mean = -33.83‰), which ranged from -74.4‰ to -20.6‰. Invertebrates on carbonates had average δ13C (per rock) = -31.0‰ (range -18.5‰ to -46.5‰) and δ15N = 5.7‰ (range -4.5‰ to +13.4‰). Average δ13C values did not differ between active and inactive sites; carbonate fauna from both settings depend on chemosynthesis-based nutrition. Community metrics reflecting trophic diversity (SEAc, total Hull Area, ranges of δ13C and δ15N) and species packing (mean distance to centroid, nearest neighbor distance) also did not vary as a function of seepage activity or site. However, distinct isotopic signatures were observed among related, co-occurring species of gastropods and polychaetes, reflecting intense microbial resource partitioning. Overall, the substrate and nutritional heterogeneity introduced by authigenic seep carbonates act to promote diverse, uniquely adapted assemblages, even after seepage ceases. The macrofauna in these ecosystems remain largely overlooked in most surveys, but are major contributors to biodiversity of chemosynthetic ecosystems and the deep sea in general.

/pdf/biodiversity-on-the-rocks-macrofauna-inhabiting-authigenic-20oz5qh1rk.pdf

Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps.

1. What are Allee effects? 2. Mechanisms for Allee effects 3. Population dynamics: modelling demographic Allee effects 4. Genetics and evolution 5. Conservation and management 6. Conclusions and perspectives

Allee Effects in Ecology and Conservation

Bathymetric gradients of biodiversity in the deep‐sea benthos constitute a major class of large‐scale biogeographic phenomena. They are typically portrayed and interpreted as variation in α diversity (the number of species recovered in individual samples) along depth transects. Here, we examine the depth ranges of deep‐sea gastropods and bivalves in the eastern and western North Atlantic. This approach shows that the abyssal molluscan fauna largely represents deeper range extensions for a subset of bathyal species. Most abyssal species have larval dispersal, and adults live at densities that appear to be too low for successful reproduction. These patterns suggest a new explanation for abyssal biodiversity. For many species, bathyal and abyssal populations may form a source‐sink system in which abyssal populations are regulated by a balance between chronic extinction arising from vulnerabilities to Allee effects and immigration from bathyal sources. An increased significance of source‐sink dynami...

http://craigmcclain.com/wp-content/uploads/2016/01/Rex_AM-NAT_2005.pdf

A Source‐Sink Hypothesis for Abyssal Biodiversity

Gastropoda and Monoplacophora from hydrothermal vents and seeps; New taxa and records

More than 100 species of gastropods from vent and seep localities around the world are reviewed, based on literature information and new material.



The following new taxa are described (localities with parentheses, systematic position within brackets): Cantrainea macleani sp.n. (Louisiana Slope) [Turbinidae]; Fucaria striata gen. et sp.n. (Juan de Fuca Ridge area), Vetuloniaphalcata sp.n. (North Fiji Basin) [both Trochidae]; Protolira valvatoides gen. et sp.n. (Mid-Atlantic Ridge) [Skeneidae]; Ventsia tricarinata gen. et sp.n. (Lau Basin), Bruceiella globulus gen. et sp.n. (Lau Basin) [both tentatively in Skeneidae]; Melanodrymia brightae sp.n. (Juan de Fuca Ridge area), Pachydermia sculpta sp.n. (Lau Basin), Planorbidella gen.n., P. depressa sp.n. (Lau Basin), Ctenopelta porifera gen. et sp.n. (EPR 13°N)[Peltospiridae]; Helicrenion reticulatum gen. et sp.n. (Lau Basin), Lepfogyra inflata sp.n. (Lau Basin) [families unknown]; Desbruyeresia spinosa gen. et sp.n. (Lau Basin), D. cancellata sp.n.(Lau Basin), D. melanioides sp.n. (Lau Basin), Provanna buccinoides sp.n. (Lau Basin) [Provannidae]; Hyalogyra vitrinelloides sp.n. (Lau Basin), Hyalogyrina grasslei s p a (Guaymas Basin)[Hyalogyrinidae fam. n.], Xylodiscula major sp.n. (North Fiji Basin) [Xylodisculidae].



The external morphology of the soft parts [for Ifremeria and Alviniconcha (Provannidae) also the anatomy] is described for most of the taxa involved.



Some features in the biology and distribution of the gastropod fauna are discussed. About half the fauna consists of species belonging to families or superfamilies endemic to this environment. One-fifth of the remaining species belong to taxa normally associated with biogenic substrates in the deep sea.



Alviniconcha hessleri has previously been shown to harbour chemosynthetic bacteria in the gill; Ifremeria nautilei is here confirmed to do the same. Ctenopelta porifera, and Hirtopelta hirta are suspected to have such bacteria because of reduction of the alimentary system.

New records, species, genera, and a new family of gastropods from hydrothermal vents and hydrocarbon seeps*

Here we describe novel forms of structural integration between endo- and episymbiotic microbes and an unusual new species of snail from hydrothermal vents in the Indian Ocean. The snail houses a dense population of -proteobacteria within the cells of its greatly enlarged esophageal gland. This tissue setting differs from that of all other vent mollusks, which harbor sulfur-oxidizing endosymbionts in their gills. The significantly reduced digestive tract, the isotopic signatures of the snail tissues, and the presence of internal bacteria suggest a dependence on chemoautotrophy for nutrition. Most notably, this snail is unique in having a dense coat of mineralized scales covering the sides of its foot, a feature seen in no other living metazoan. The scales are coated with iron sulfides (pyrite and greigite) and heavily colonized by - and -proteobacteria, likely participating in mineralization of the sclerites. This novel metazoan-microbial collaboration illustrates the great potential of organismal adaptation in chemically and physically challenging deep-sea environments.

http://fire.biol.wwu.edu/cmoyer/zztemp_fire/biol508_F04/Goffredi_04.pdf

Anders Warén

Papers

Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps.

A Source‐Sink Hypothesis for Abyssal Biodiversity

Gastropoda and Monoplacophora from hydrothermal vents and seeps; New taxa and records

New records, species, genera, and a new family of gastropods from hydrothermal vents and hydrocarbon seeps*

Novel Forms of Structural Integration between Microbes and a Hydrothermal Vent Gastropod from the Indian Ocean