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Bojan Tunguz
Researcher at Nvidia
Publications - 8
Citations - 183
Bojan Tunguz is an academic researcher from Nvidia. The author has contributed to research in topics: RNA & Computer science. The author has an hindex of 3, co-authored 6 publications receiving 53 citations. Previous affiliations of Bojan Tunguz include Stanford University.
Papers
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Journal ArticleDOI
Analysis of the Human Protein Atlas Image Classification competition.
Wei Ouyang,Casper F. Winsnes,Martin Hjelmare,Anthony J. Cesnik,Lovisa Åkesson,Hao Xu,Devin P. Sullivan,Shubin Dai,Jun Lan,Park Jinmo,Shaikat M. Galib,Christof Henkel,Kevin Hwang,Dmytro Poplavskiy,Bojan Tunguz,Russel D. Wolfinger,Gu Yinzheng,Chuanpeng Li,Jinbin Xie,Dmitry Buslov,Sergei Fironov,Alexander Kiselev,Dmytro Panchenko,Xuan Cao,Runmin Wei,Yuanhao Wu,Xun Zhu,Kuan-Lun Tseng,Zhifeng Gao,Cheng Ju,Xiaohan Yi,Hongdong Zheng,Constantin Kappel,Emma Lundberg,Emma Lundberg +34 more
TL;DR: The winning models far outperformed the previous effort at multi-label classification of protein localization patterns by ~20% and can be used as classifiers to annotate new images, feature extractors to measure pattern similarity or pretrained networks for a wide range of biological applications.
Journal ArticleDOI
Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics
Kathrin Leppek,Gun Woo Byeon,Wipapat Kladwang,Hannah K. Wayment-Steele,Craig H. Kerr,Adele F. Xu,Do Soon Kim,Ved V Topkar,Christian A Choe,Daphna Rothschild,Gerald C. Tiu,Roger Wellington-Oguri,Kotaro Fujii,Eesha Sharma,Andrew M. Watkins,John J Nicol,Jonathan Romano,Bojan Tunguz,Huishan Cai,Pengbo Guo,Jiewei Wu,Fanyu Meng,Shuai Shi,Eterna Participants,Philip R. Dormitzer,Alicia Solórzano,Maria Barna,Rhiju Das +27 more
TL;DR: PERSIST-seq as discussed by the authors uses RNA sequencing-based platform to systematically delineate in-cell mRNA stability, ribosome load, as well as in-solution stability of a library of diverse mRNAs.
Posted ContentDOI
Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics
Kathrin Leppek,Gun Woo Byeon,Wipapat Kladwang,Hannah K. Wayment-Steele,Craig H. Kerr,Adele F. Xu,Do Soon Kim,Ved V Topkar,Christian A Choe,Daphna Rothschild,Gerald C. Tiu,Roger Wellington-Oguri,Kotaro Fujii,Eesha Sharma,Andrew M. Watkins,John J Nicol,Jonathan Romano,Bojan Tunguz,Eterna Participants,Maria Barna,Rhiju Das +20 more
TL;DR: PERSIST-seq as mentioned in this paper is a new RNA sequencing-based platform to systematically delineate in-cell mRNA stability, ribosome load, as well as in-solution stability of a library of diverse mRNAs.
Proceedings ArticleDOI
GPU Accelerated Feature Engineering and Training for Recommender Systems
Benedikt Schifferer,Gilberto Titericz,Chris Deotte,Christof Henkel,Kazuki Onodera,Jiwei Liu,Bojan Tunguz,Even Oldridge,Gabriel de Souza Pereira Moreira,Ahmet Erdem +9 more
TL;DR: This paper presents the 1st place solution of the RecSys Challenge 2020 which focused on the prediction of user behavior, specifically the interaction with content, on this year’s dataset from competition host Twitter, and achieved the highest score in seven of the eight metrics used to calculate the final leaderboard position.
Posted Content
GPU Accelerated Exhaustive Search for Optimal Ensemble of Black-Box Optimization Algorithms.
TL;DR: It is shown that a simple ensemble of black-box optimization algorithms can outperform any single one of them, and a Multi-GPU-optimized framework is proposed to accelerate a brute force search for the optimal ensemble by running many experiments in parallel.