Three parallel algorithms for classical molecular dynamics are presented. The first assigns each processor a fixed subset of atoms; the second assigns each a fixed subset of inter-atomic forces to compute; the third assigns each a fixed spatial region. The algorithms are suitable for molecular dynamics models which can be difficult to parallelize efficiently—those with short-range forces where the neighbors of each atom change rapidly. They can be implemented on any distributed-memory parallel machine which allows for message-passing of data between independently executing processors. The algorithms are tested on a standard Lennard-Jones benchmark problem for system sizes ranging from 500 to 100,000,000 atoms on several parallel supercomputers--the nCUBE 2, Intel iPSC/860 and Paragon, and Cray T3D. Comparing the results to the fastest reported vectorized Cray Y-MP and C90 algorithm shows that the current generation of parallel machines is competitive with conventional vector supercomputers even for small problems. For large problems, the spatial algorithm achieves parallel efficiencies of 90% and a 1840-node Intel Paragon performs up to 165 faster than a single Cray C9O processor. Trade-offs between the three algorithms and guidelines for adapting them to more complex molecular dynamics simulations are also discussed.

Fast parallel algorithms for short-range molecular dynamics

Driven by the visions of Internet of Things and 5G communications, recent years have seen a paradigm shift in mobile computing, from the centralized mobile cloud computing toward mobile edge computing (MEC). The main feature of MEC is to push mobile computing, network control and storage to the network edges (e.g., base stations and access points) so as to enable computation-intensive and latency-critical applications at the resource-limited mobile devices. MEC promises dramatic reduction in latency and mobile energy consumption, tackling the key challenges for materializing 5G vision. The promised gains of MEC have motivated extensive efforts in both academia and industry on developing the technology. A main thrust of MEC research is to seamlessly merge the two disciplines of wireless communications and mobile computing, resulting in a wide-range of new designs ranging from techniques for computation offloading to network architectures. This paper provides a comprehensive survey of the state-of-the-art MEC research with a focus on joint radio-and-computational resource management. We also discuss a set of issues, challenges, and future research directions for MEC research, including MEC system deployment, cache-enabled MEC, mobility management for MEC, green MEC, as well as privacy-aware MEC. Advancements in these directions will facilitate the transformation of MEC from theory to practice. Finally, we introduce recent standardization efforts on MEC as well as some typical MEC application scenarios.

A Survey on Mobile Edge Computing: The Communication Perspective

Driven by the visions of Internet of Things and 5G communications, recent years have seen a paradigm shift in mobile computing, from the centralized Mobile Cloud Computing towards Mobile Edge Computing (MEC). The main feature of MEC is to push mobile computing, network control and storage to the network edges (e.g., base stations and access points) so as to enable computation-intensive and latency-critical applications at the resource-limited mobile devices. MEC promises dramatic reduction in latency and mobile energy consumption, tackling the key challenges for materializing 5G vision. The promised gains of MEC have motivated extensive efforts in both academia and industry on developing the technology. A main thrust of MEC research is to seamlessly merge the two disciplines of wireless communications and mobile computing, resulting in a wide-range of new designs ranging from techniques for computation offloading to network architectures. This paper provides a comprehensive survey of the state-of-the-art MEC research with a focus on joint radio-and-computational resource management. We also present a research outlook consisting of a set of promising directions for MEC research, including MEC system deployment, cache-enabled MEC, mobility management for MEC, green MEC, as well as privacy-aware MEC. Advancements in these directions will facilitate the transformation of MEC from theory to practice. Finally, we introduce recent standardization efforts on MEC as well as some typical MEC application scenarios.

/pdf/a-break-in-the-clouds-towards-a-cloud-definition-svovsw1r5a.pdf

A Break in the Clouds: Towards a Cloud Definition

A multiobjective optimization problem involves several conflicting objectives and has a set of Pareto optimal solutions. By evolving a population of solutions, multiobjective evolutionary algorithms (MOEAs) are able to approximate the Pareto optimal set in a single run. MOEAs have attracted a lot of research effort during the last 20 years, and they are still one of the hottest research areas in the field of evolutionary computation. This paper surveys the development of MOEAs primarily during the last eight years. It covers algorithmic frameworks such as decomposition-based MOEAs (MOEA/Ds), memetic MOEAs, coevolutionary MOEAs, selection and offspring reproduction operators, MOEAs with specific search methods, MOEAs for multimodal problems, constraint handling and MOEAs, computationally expensive multiobjective optimization problems (MOPs), dynamic MOPs, noisy MOPs, combinatorial and discrete MOPs, benchmark problems, performance indicators, and applications. In addition, some future research issues are also presented.

Multiobjective evolutionary algorithms: A survey of the state of the art

Twitter, as a form of social media, is fast emerging in recent years. Users are using Twitter to report real-life events. This paper focuses on  detecting those events by analyzing the text stream in Twitter. Although event detection has long been a research topic, the characteristics of Twitter make it a non-trivial task. Tweets reporting such events are usually overwhelmed by high flood of meaningless “babbles”. Moreover, event detection algorithm needs to be scalable given the sheer amount of tweets. This paper attempts to tackle these challenges with EDCoW (Event Detection with Clustering of Wavelet-based Signals). EDCoW builds signals for individual words by applying wavelet analysis on the frequencybased raw signals of the words. It then filters away the trivial words by looking at their corresponding signal autocorrelations. The remaining words are then clustered to form events with a modularity-based graph partitioning technique. Experimental results show promising result of EDCoW.

/pdf/event-detection-in-twitter-a4axbvhtok.pdf

Event Detection in Twitter

In cloud computing, cloud providers can offer cloud consumers two provisioning plans for computing resources, namely reservation and on-demand plans. In general, cost of utilizing computing resources provisioned by reservation plan is cheaper than that provisioned by on-demand plan, since cloud consumer has to pay to provider in advance. With the reservation plan, the consumer can reduce the total resource provisioning cost. However, the best advance reservation of resources is difficult to be achieved due to uncertainty of consumer's future demand and providers' resource prices. To address this problem, an optimal cloud resource provisioning (OCRP) algorithm is proposed by formulating a stochastic programming model. The OCRP algorithm can provision computing resources for being used in multiple provisioning stages as well as a long-term plan, e.g., four stages in a quarter plan and twelve stages in a yearly plan. The demand and price uncertainty is considered in OCRP. In this paper, different approaches to obtain the solution of the OCRP algorithm are considered including deterministic equivalent formulation, sample-average approximation, and Benders decomposition. Numerical studies are extensively performed in which the results clearly show that with the OCRP algorithm, cloud consumer can successfully minimize total cost of resource provisioning in cloud computing environments.

Optimization of Resource Provisioning Cost in Cloud Computing

One of the major issues that affect the performance of Mobile Ad hoc NETworks (MANET) is routing. Recently, position-based routing for MANET is found to be a very promising routing strategy for inter-vehicular communication systems (IVCS). However, position-based routing for IVCS in a built-up city environment faces greater challenges because of potentially more uneven distribution of vehicular nodes, constrained mobility, and difficult signal reception due to radio obstacles such as high-rise buildings. This paper proposes a new position-based routing scheme called Anchor-based Street and Traffic Aware Routing (A-STAR), designed specifically for IVCS in a city environment. Unique to A-STAR is the usage of information on city bus routes to identify an anchor path with high connectivity for packet delivery. Along with a new recovery strategy for packets routed to a local maximum, the proposed protocol shows significant performance improvement in a comparative simulation study with other similar routing approaches.

/pdf/a-star-a-mobile-ad-hoc-routing-strategy-for-metropolis-5ala8bkx7e.pdf

A-STAR: A Mobile Ad Hoc Routing Strategy for Metropolis Vehicular Communications

The key barrier to widespread uptake of cloud computing is the lack of trust in clouds by potential customers. While preventive controls for security and privacy are actively researched, there is still little focus on detective controls related to cloud accountability and audit ability. The complexity resulting from large-scale virtualization and data distribution carried out in current clouds has revealed an urgent research agenda for cloud accountability, as has the shift in focus of customer concerns from servers to data. This paper discusses key issues and challenges in achieving a trusted cloud through the use of detective controls, and presents the Trust Cloud framework, which addresses accountability in cloud computing via technical and policy-based approaches.

http://www.hpl.hp.com/techreports/2011/HPL-2011-38.pdf

TrustCloud: A Framework for Accountability and Trust in Cloud Computing

Cloud computing provides users an efficient way to dynamically allocate computing resources to meet demands. Cloud providers can offer users two payment plans, i.e., reservation and on-demand plans for resource provisioning. Price of resources in reservation plan is generally cheaper than that in on-demand plan. However, since the reservation plan has to be acquired in advance, it may not fully meet future demands in which the on-demand plan can be used to guarantee the availability to the user. In this paper, we propose an optimal virtual machine placement (OVMP) algorithm. This algorithm can minimize the cost spending in each plan for hosting virtual machines in a multiple cloud provider environment under future demand and price uncertainty. OVMP algorithm makes a decision based on the optimal solution of stochastic integer programming (SIP) to rent resources from cloud providers. The performance of OVMP algorithm is evaluated by numerical studies and simulation. The results clearly show that the proposed OVMP algorithm can minimize users' budgets. This algorithm can be applied to provision resources in emerging cloud computing environments.

Bu-Sung Lee

Papers

Event Detection in Twitter

Optimization of Resource Provisioning Cost in Cloud Computing

A-STAR: A Mobile Ad Hoc Routing Strategy for Metropolis Vehicular Communications

TrustCloud: A Framework for Accountability and Trust in Cloud Computing

Optimal virtual machine placement across multiple cloud providers