C
Cairui Lu
Researcher at Huazhong Agricultural University
Publications - 13
Citations - 2936
Cairui Lu is an academic researcher from Huazhong Agricultural University. The author has contributed to research in topics: Gossypium raimondii & Genome. The author has an hindex of 9, co-authored 13 publications receiving 2402 citations.
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Journal ArticleDOI
Genome sequence of cultivated Upland cotton ( Gossypium hirsutum TM-1) provides insights into genome evolution
Fuguang Li,Guangyi Fan,Cairui Lu,Guanghui Xiao,Changsong Zou,Russell J. Kohel,Zhiying Ma,Haihong Shang,Xiongfeng Ma,Jianyong Wu,Xinming Liang,Gai Huang,Richard G. Percy,Kun Liu,Weihua Yang,Wenbin Chen,Xiongming Du,Chengcheng Shi,Youlu Yuan,Wuwei Ye,Xin Liu,Xueyan Zhang,Weiqing Liu,Hengling Wei,Shoujun Wei,Guodong Huang,Xianlong Zhang,Shuijin Zhu,He Zhang,Fengming Sun,Xingfen Wang,Jie Liang,Jiahao Wang,Qiang He,Leihuan Huang,Jun Wang,Jinjie Cui,Guoli Song,Kunbo Wang,Xun Xu,John Z. Yu,Yu-Xian Zhu,Shuxun Yu +42 more
TL;DR: A draft genome using 181-fold paired-end sequences assisted by fivefold BAC-to-BAC sequences and a high-resolution genetic map is produced for G. hirsutum, revealing conserved gene order and concerted evolution of different regulatory mechanisms for Cellulose synthase and 1-Aminocyclopropane-1-carboxylic acid oxidase1 and 3 may be important for enhanced fiber production.
Journal ArticleDOI
The draft genome of a diploid cotton Gossypium raimondii.
Kunbo Wang,Zhiwen Wang,Fuguang Li,Wuwei Ye,Junyi Wang,Guoli Song,Zhen Yue,Lin Cong,Haihong Shang,Shilin Zhu,Changsong Zou,Qin Li,Youlu Yuan,Cairui Lu,Hengling Wei,Caiyun Gou,Zheng Zequn,Ye Yin,Xueyan Zhang,Kun Liu,Bo Wang,Chi Song,Nan Shi,Russell J. Kohel,Richard G. Percy,John Z. Yu,Yu-Xian Zhu,Jun Wang,Shuxun Yu +28 more
TL;DR: Cotton, and probably Theobroma cacao, are the only sequenced plant species that possess an authentic CDN1 gene family for gossypol biosynthesis, as revealed by phylogenetic analysis.
Journal ArticleDOI
Genome sequence of the cultivated cotton Gossypium arboreum
Fuguang Li,Guangyi Fan,Kunbo Wang,Fengming Sun,Youlu Yuan,Guoli Song,Qin Li,Zhiying Ma,Cairui Lu,Changsong Zou,Wenbin Chen,Xinming Liang,Haihong Shang,Weiqing Liu,Chengcheng Shi,Guanghui Xiao,Caiyun Gou,Wuwei Ye,Xun Xu,Xueyan Zhang,Hengling Wei,Zhifang Li,Guiyin Zhang,Junyi Wang,Kun Liu,Russell J. Kohel,Richard G. Percy,John Z. Yu,Yu-Xian Zhu,Jun Wang,Shuxun Yu +30 more
TL;DR: Comparative transcriptome studies showed the key role of the nucleotide binding site (NBS)-encoding gene family in resistance to Verticillium dahliae and the involvement of ethylene in the development of cotton fiber cells.
Journal ArticleDOI
Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits.
Xiongming Du,Gai Huang,Gai Huang,Shoupu He,Zhaoen Yang,Gaofei Sun,Xiongfeng Ma,Nan Li,Xueyan Zhang,Junling Sun,Min Liu,Yinhua Jia,Zhaoe Pan,Wenfang Gong,Zhaohui Liu,Zhu Heqin,Lei Ma,Fuyan Liu,Daigang Yang,Fan Wang,Wei Fan,Qian Gong,Zhen Peng,Liru Wang,Xiaoyang Wang,Shuangjiao Xu,Haihong Shang,Cairui Lu,Hongkun Zheng,Sanwen Huang,Tao Lin,Yu-Xian Zhu,Yu-Xian Zhu,Fuguang Li +33 more
TL;DR: The authors report an improved genome assembly of G. arboretum and resequencing of 243 diploid cotton accessions, which represents a major step toward understanding the evolution of the A genome of cotton.
Journal ArticleDOI
Transcriptome analysis reveals long noncoding RNAs involved in fiber development in cotton (Gossypium arboreum).
Changsong Zou,Qiaolian Wang,Cairui Lu,Wencui Yang,Youping Zhang,Hailiang Cheng,Xiaoxu Feng,Mtawa Andrew Prosper,Guoli Song +8 more
TL;DR: A set of lncRNAs that are involved in fiber development that can be classified as long intergenic noncoding RNAs (lincRNAs) and natural antisense transcripts (lncNAT) are described.