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Guangyi Fan
Researcher at Beijing Genomics Institute
Publications - 163
Citations - 10595
Guangyi Fan is an academic researcher from Beijing Genomics Institute. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 28, co-authored 130 publications receiving 7227 citations. Previous affiliations of Guangyi Fan include University of Macau.
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Journal ArticleDOI
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
Boulos Chalhoub,Shengyi Liu,Isobel A. P. Parkin,Haibao Tang,Haibao Tang,Xiyin Wang,Julien Chiquet,Harry Belcram,Chaobo Tong,Birgit Samans,Margot Correa,Corinne Da Silva,Jérémy Just,Cyril Falentin,Chu Shin Koh,Isabelle Le Clainche,Maria Bernard,Pascal Bento,Benjamin Noel,Karine Labadie,Adriana Alberti,Mathieu Charles,Dominique Arnaud,Hui Guo,Christian Daviaud,Salman Alamery,Kamel Jabbari,Kamel Jabbari,Meixia Zhao,Patrick P. Edger,Houda Chelaifa,David C. Tack,Gilles Lassalle,Imen Mestiri,Nicolas Schnel,Marie-Christine Le Paslier,Guangyi Fan,Victor Renault,Philippe E. Bayer,Agnieszka A. Golicz,Sahana Manoli,Tae-Ho Lee,Vinh Ha Dinh Thi,Smahane Chalabi,Qiong Hu,Chuchuan Fan,Reece Tollenaere,Yunhai Lu,Christophe Battail,Jinxiong Shen,Christine Sidebottom,Xinfa Wang,Aurélie Canaguier,Aurélie Chauveau,Aurélie Bérard,G. Deniot,Mei Guan,Zhongsong Liu,Fengming Sun,Yong Pyo Lim,Eric Lyons,Christopher D. Town,Ian Bancroft,Xiaowu Wang,Jinling Meng,Jianxin Ma,J. Chris Pires,Graham J.W. King,Dominique Brunel,Régine Delourme,Michel Renard,Jean-Marc Aury,Keith L. Adams,Jacqueline Batley,Jacqueline Batley,Rod J. Snowdon,Jörg Tost,David Edwards,David Edwards,Yongming Zhou,Wei Hua,Andrew G. Sharpe,Andrew H. Paterson,Chunyun Guan,Patrick Wincker,Patrick Wincker,Patrick Wincker +86 more
TL;DR: The polyploid genome of Brassica napus, which originated from a recent combination of two distinct genomes approximately 7500 years ago and gave rise to the crops of rape oilseed, is sequenced.
Journal ArticleDOI
Genome sequence of cultivated Upland cotton ( Gossypium hirsutum TM-1) provides insights into genome evolution
Fuguang Li,Guangyi Fan,Cairui Lu,Guanghui Xiao,Changsong Zou,Russell J. Kohel,Zhiying Ma,Haihong Shang,Xiongfeng Ma,Jianyong Wu,Xinming Liang,Gai Huang,Richard G. Percy,Kun Liu,Weihua Yang,Wenbin Chen,Xiongming Du,Chengcheng Shi,Youlu Yuan,Wuwei Ye,Xin Liu,Xueyan Zhang,Weiqing Liu,Hengling Wei,Shoujun Wei,Guodong Huang,Xianlong Zhang,Shuijin Zhu,He Zhang,Fengming Sun,Xingfen Wang,Jie Liang,Jiahao Wang,Qiang He,Leihuan Huang,Jun Wang,Jinjie Cui,Guoli Song,Kunbo Wang,Xun Xu,John Z. Yu,Yu-Xian Zhu,Shuxun Yu +42 more
TL;DR: A draft genome using 181-fold paired-end sequences assisted by fivefold BAC-to-BAC sequences and a high-resolution genetic map is produced for G. hirsutum, revealing conserved gene order and concerted evolution of different regulatory mechanisms for Cellulose synthase and 1-Aminocyclopropane-1-carboxylic acid oxidase1 and 3 may be important for enhanced fiber production.
Journal ArticleDOI
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
Rajeev K. Varshney,Rajeev K. Varshney,Wenbin Chen,Yupeng Li,Arvind K. Bharti,Rachit K. Saxena,Jessica A. Schlueter,Mark T.A. Donoghue,Sarwar Azam,Guangyi Fan,Adam M. Whaley,Andrew Farmer,Jaime Sheridan,Aiko Iwata,Reetu Tuteja,Reetu Tuteja,R. Varma Penmetsa,Wei Wu,Hari D. Upadhyaya,Shiaw-Pyng Yang,Trushar Shah,Kulbhushan Saxena,Todd P. Michael,W. Richard McCombie,Bicheng Yang,Gengyun Zhang,Huanming Yang,Jun Wang,Jun Wang,Charles Spillane,Douglas R. Cook,Gregory D. May,Xun Xu,Scott A. Jackson +33 more
TL;DR: This reference genome sequence will facilitate the identification of the genetic basis of agronomically important traits, and accelerate the development of improved pigeonpea varieties that could improve food security in many developing countries.
Journal ArticleDOI
Genome sequence of the cultivated cotton Gossypium arboreum
Fuguang Li,Guangyi Fan,Kunbo Wang,Fengming Sun,Youlu Yuan,Guoli Song,Qin Li,Zhiying Ma,Cairui Lu,Changsong Zou,Wenbin Chen,Xinming Liang,Haihong Shang,Weiqing Liu,Chengcheng Shi,Guanghui Xiao,Caiyun Gou,Wuwei Ye,Xun Xu,Xueyan Zhang,Hengling Wei,Zhifang Li,Guiyin Zhang,Junyi Wang,Kun Liu,Russell J. Kohel,Richard G. Percy,John Z. Yu,Yu-Xian Zhu,Jun Wang,Shuxun Yu +30 more
TL;DR: Comparative transcriptome studies showed the key role of the nucleotide binding site (NBS)-encoding gene family in resistance to Verticillium dahliae and the involvement of ethylene in the development of cotton fiber cells.
Journal ArticleDOI
NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice
Jingying Zhang,Yong-Xin Liu,Na Zhang,Bin Hu,Tao Jin,Haoran Xu,Yuan Qin,Pengxu Yan,Xiaoning Zhang,Xiaoxuan Guo,Jing Hui,Shouyun Cao,Xin Wang,Chao Wang,Hui Wang,Baoyuan Qu,Guangyi Fan,Lixing Yuan,Ruben Garrido-Oter,Chengcai Chu,Yang Bai +20 more
TL;DR: The links between plant genotype and root microbiota membership established in this study will inform breeding strategies to improve nitrogen use in crops and coordinate recruitment of the root microbiota to optimize nitrogen acquisition from soil.