C
Chunfu Xu
Researcher at University of Washington
Publications - 16
Citations - 1813
Chunfu Xu is an academic researcher from University of Washington. The author has contributed to research in topics: Protein structure & Helix. The author has an hindex of 12, co-authored 16 publications receiving 1409 citations. Previous affiliations of Chunfu Xu include Emory University.
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Journal ArticleDOI
Design of a hyperstable 60-subunit protein icosahedron
Yang Hsia,Jacob B. Bale,Shane Gonen,Dan Shi,William Sheffler,Kimberly K. Fong,Una Nattermann,Chunfu Xu,Po-Ssu Huang,Rashmi Ravichandran,Sue Yi,Trisha N. Davis,Tamir Gonen,Neil P. King,David Baker +14 more
TL;DR: The computational design of a 25-nanometre icosahedral nanocage that self-assembles from trimeric protein building blocks is described, and such robust and customizable nanocages should have considerable utility in targeted drug delivery, vaccine design and synthetic biology.
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Atomic-accuracy models from 4.5-A cryo-electron microscopy data with density-guided iterative local refinement
Frank DiMaio,Yifan Song,Xueming Li,Matthias J. Brunner,Chunfu Xu,Vincent P. Conticello,Edward H. Egelman,Thomas C. Marlovits,Yifan Cheng,David Baker +9 more
TL;DR: A general approach for refining protein structure models on the basis of cryo-electron microscopy maps with near-atomic resolution that integrates Monte Carlo sampling with local density-guided optimization, Rosetta all-atom refinement and real-space B-factor fitting is described.
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De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Scott E. Boyken,Zibo Chen,Benjamin Groves,Robert A. Langan,Gustav Oberdorfer,Alex Ford,Jason M. Gilmore,Chunfu Xu,Frank DiMaio,Jose Henrique Pereira,Banumathi Sankaran,Georg Seelig,Peter H. Zwart,David Baker +13 more
TL;DR: The ability to design extensive hydrogen-bond networks with atomic accuracy enables the programming of protein interaction specificity for a broad range of synthetic biology applications; more generally, the results demonstrate that, even with the tremendous diversity observed in nature, there are fundamentally new modes of interaction to be discovered in proteins.
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High thermodynamic stability of parametrically designed helical bundles.
Po-Ssu Huang,Gustav Oberdorfer,Gustav Oberdorfer,Chunfu Xu,Xue Y. Pei,Brent L. Nannenga,Joseph M. Rogers,Frank DiMaio,Tamir Gonen,Ben F. Luisi,David Baker +10 more
TL;DR: Protein design expands the repertoire of coiled-coil structures to α-helical barrels and hyperstable helical bundles, and describes a procedure for designing proteins with backbones produced by varying the parameters in the Crick coiled coil–generating equations.
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Structurally defined nanoscale sheets from self-assembly of collagen-mimetic peptides.
Tao Jiang,Chunfu Xu,Yang Liu,Zheng Liu,Joseph S. Wall,Xiaobing Zuo,Tianquan Lian,Khalid Salaita,Chaoying Ni,Darrin J. Pochan,Vincent P. Conticello +10 more
TL;DR: This investigation provides a design rubric for fabrication of structurally defined, peptide-based nanosheets using the principles of solution-based self-assembly facilitated through complementary electrostatic interactions.