F
Filippo Piccinini
Researcher at University of Bologna
Publications - 72
Citations - 2080
Filippo Piccinini is an academic researcher from University of Bologna. The author has contributed to research in topics: Computer science & Image processing. The author has an hindex of 17, co-authored 62 publications receiving 1429 citations.
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Journal ArticleDOI
3D tumor spheroid models for in vitro therapeutic screening: a systematic approach to enhance the biological relevance of data obtained
Michele Zanoni,Filippo Piccinini,Chiara Arienti,Alice Zamagni,Spartaco Santi,R. Polico,Alessandro Bevilacqua,Anna Tesei +7 more
TL;DR: The analyses, carried out using a novel open source software capable of performing an automatic image analysis of 3D tumor colonies, showed that a number of morphology parameters affect the response of large spheroidids to treatment and indicate the need for a pre-selection of tumor spheroids of homogeneous volume and shape before use in a cytotoxicity test.
Journal ArticleDOI
CIDRE: an illumination-correction method for optical microscopy
Kevin Smith,Yunpeng Li,Filippo Piccinini,Gabor Csucs,Csaba Balazs,Alessandro Bevilacqua,Peter Horvath +6 more
TL;DR: The approach overcomes issues for most optical microscopy applications without the need for reference images, and overcomes the most reliable correction methods require special reference images.
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CellTracker (not only) for dummies
TL;DR: This work presents CellTracker, a user-friendly open-source software tool for tracking cells imaged with various imaging modalities, including fluorescent, phase contrast and differential interference contrast (DIC) techniques.
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Colour deconvolution: stain unmixing in histological imaging
TL;DR: colour deconvolution is presented here in two open-source forms: a MATLAB program/function and an ImageJ plugin written in Java, which run in Windows, Macintosh, and UNIX-based systems under the respective platforms.
Journal ArticleDOI
Phenotypic Image Analysis Software Tools for Exploring and Understanding Big Image Data from Cell-Based Assays
Kevin Smith,Filippo Piccinini,Tamas Balassa,Krisztian Koos,Tivadar Danka,Hossein Azizpour,Peter Horvath,Peter Horvath +7 more
TL;DR: The strengths and weaknesses of non-commercial phenotypic image analysis software are examined, recent developments in the field are covered, challenges are identified, and a perspective on future possibilities are given.