G
Gregory R. Bowman
Researcher at Washington University in St. Louis
Publications - 135
Citations - 9162
Gregory R. Bowman is an academic researcher from Washington University in St. Louis. The author has contributed to research in topics: Biology & Chemistry. The author has an hindex of 41, co-authored 107 publications receiving 7462 citations. Previous affiliations of Gregory R. Bowman include University of Washington & University of California, Berkeley.
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Journal ArticleDOI
Everything you wanted to know about Markov State Models but were afraid to ask.
TL;DR: How the Markov State Models approach is part of a paradigm shift in how one uses simulations, away from anecdotal single-trajectory approaches to a more comprehensive statistical approach is discussed.
Journal ArticleDOI
Molecular Simulation of ab Initio Protein Folding for a Millisecond Folder NTL9(1-39)
TL;DR: Simulations of several folding trajectories of NTL9(1-39), a protein which has a folding time of approximately 1.5 ms, show a gap in the implied time scales indicative of two-state folding and heterogeneous pathways connecting diffuse mesoscopic substates and suggest beta(12) hairpin formation may be rate-limiting.
BookDOI
An Introduction to Markov State Models and Their Application to Long Timescale Molecular Simulation
TL;DR: The aim of this book volume is to explain the importance of Markov state models to molecular simulation, how they work, and how they can be applied to a range of problems.
Journal ArticleDOI
Exploiting a natural conformational switch to engineer an interleukin-2 'superkine'
Aron M. Levin,Darren L. Bates,Aaron M. Ring,Carsten Krieg,Jack T. Lin,Leon Su,Ignacio Moraga,Miro E. Raeber,Gregory R. Bowman,Paul Novick,Vijay S. Pande,C. Garrison Fathman,Onur Boyman,K. Christopher Garcia +13 more
TL;DR: In vitro evolution has mimicked the functional role of CD25 in enhancing IL-2 potency and regulating target cell specificity, which has implications for immunotherapy.
Journal ArticleDOI
Progress and challenges in the automated construction of Markov state models for full protein systems.
TL;DR: This work demonstrates the application of a toolkit for automating the construction ofMarkov state models to the villin headpiece (HP-35 NleNle), one of the smallest and fastest folding proteins, and shows that the resulting MSM captures both the thermodynamics and kinetics of the original molecular dynamics of the system.