H
Hisasi Kikuchi
Researcher at National Institute of Technology and Evaluation
Publications - 17
Citations - 2033
Hisasi Kikuchi is an academic researcher from National Institute of Technology and Evaluation. The author has contributed to research in topics: Pyrococcus horikoshii & Aeropyrum pernix. The author has an hindex of 15, co-authored 17 publications receiving 2007 citations.
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Journal ArticleDOI
Complete Sequence and Gene Organization of the Genome of a Hyper-thermophilic Archaebacterium, Pyrococcus horikoshii OT3
Yutaka Kawarabayasi,Mituhiro Sawada,Hiroshi Horikawa,Yuji Haikawa,Yumi Hino,Saori Yamamoto,Mitsuo Sekine,Sin-ichi Baba,Hiroki Kosugi,Akira Hosoyama,Yoshimi Nagai,Mari Sakai,Keiko Ogura,Rie Otsuka,Hidekazu Nakazawa,Minako Takamiya,Yuhko Ohfuku,Tomomichi Funahashi,Toshihiro Tanaka,Yutaka Kudoh,Jun Yamazaki,Norihiro Kushida,Akio Oguchi,Ken-ichi Aoki,Takio Yoshizawa,Yoshinobu Nakamura,Frank T. Robb,Koki Horikoshi,Yaeko Masuchi,Hiroaki Shizuya,Hisasi Kikuchi +30 more
TL;DR: The complete sequence of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3, has been determined by assembling the sequences of the physical map-based contigs of fosmid clones and of long polymerase chain reaction (PCR) products which were used for gap-filling.
Journal ArticleDOI
Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.
Yutaka Kawarabayasi,Yumi Hino,Hirosh Horikawa,Syuji Yamazaki,Yuji Haikawa,Koji Jin-no,Mikio Takahashi,Mitsuo Sekine,Sin-ichi Baba,Akiho Ankai,Hiroki Kosugi,Akira Hosoyama,Shigehiro Fukui,Yoshimi Nagai,Keiko Nishijima,Hidekazu Nakazawa,Minako Takamiya,Sayaka Masuda,Tomomichi Funahashi,Toshihiro Tanaka,Yutaka Kudoh,Jun Yamazaki,Norihiro Kushida,Akio Oguchi,Ken-ichi Aoki,Kenji Kubota,Yoshinobu Nakamura,Norimichi Nomura,Yoshihiko Sako,Hisasi Kikuchi +29 more
TL;DR: The complete sequence of the genome of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1, which optimally grows at 95 degrees C, has been determined by the whole genome shotgun method with some modifications.
Journal ArticleDOI
Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7.
Yutaka Kawarabayasi,Yumi Hino,Hiroshi Horikawa,Koji Jin-no,Mikio Takahashi,Mitsuo Sekine,Sin-ichi Baba,Akiho Ankai,Hiroki Kosugi,Akira Hosoyama,Shigehiro Fukui,Yoshimi Nagai,Keiko Nishijima,Rie Otsuka,Hidekazu Nakazawa,Minako Takamiya,Yumiko Kato,Takio Yoshizawa,Toshihiro Tanaka,Yutaka Kudoh,Jun Yamazaki,Norihiro Kushida,Akio Oguchi,Ken-ichi Aoki,Sayaka Masuda,Masao Yanagii,Masami Nishimura,Akihiko Yamagishi,Tairo Oshima,Hisasi Kikuchi +29 more
TL;DR: Sequence comparison provided evidence suggesting the integration of plasmid, rearrangement of genomic structure, and duplication of genomic regions that may be responsible for the larger genomic size of the S. tokodaii strain7 genome.
Journal ArticleDOI
Substrate recognition by class i lysyl-trna synthetases : a molecular basis for gene displacement
TL;DR: Genes encoding both an archaeal and a bacterial class I enzyme were able to rescue an Escherichia coli strain deficient in LysRS, indicating their ability to functionally substitute for a class II LysRS in vivo.
Journal ArticleDOI
The molecular structure of hyperthermostable aromatic aminotransferase with novel substrate specificity from Pyrococcus horikoshii.
Ikuo Matsui,Eriko Matsui,Yukihiro Sakai,Hisasi Kikuchi,Yutaka Kawarabayasi,Hideaki Ura,Shinichi Kawaguchi,Seiki Kuramitsu,Kazuaki Harata +8 more
TL;DR: The crystal structure of this aminotransferase from the hyperthermophilic archaeon Pyrococcus horikoshii was determined and it was found that the enzyme recognizes the aromatic substrate by hydrophobic interaction with aromatic rings (Phe121 and Tyr59*) and probably recognizes acidic substrates by a hydrophilic interaction involving a hydrogen bond network with Thr264*.