J
Jun Yamazaki
Researcher at National Institute of Technology and Evaluation
Publications - 12
Citations - 1592
Jun Yamazaki is an academic researcher from National Institute of Technology and Evaluation. The author has contributed to research in topics: Gene & Peptide sequence. The author has an hindex of 7, co-authored 12 publications receiving 1565 citations. Previous affiliations of Jun Yamazaki include Ajinomoto.
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Journal ArticleDOI
Complete Sequence and Gene Organization of the Genome of a Hyper-thermophilic Archaebacterium, Pyrococcus horikoshii OT3
Yutaka Kawarabayasi,Mituhiro Sawada,Hiroshi Horikawa,Yuji Haikawa,Yumi Hino,Saori Yamamoto,Mitsuo Sekine,Sin-ichi Baba,Hiroki Kosugi,Akira Hosoyama,Yoshimi Nagai,Mari Sakai,Keiko Ogura,Rie Otsuka,Hidekazu Nakazawa,Minako Takamiya,Yuhko Ohfuku,Tomomichi Funahashi,Toshihiro Tanaka,Yutaka Kudoh,Jun Yamazaki,Norihiro Kushida,Akio Oguchi,Ken-ichi Aoki,Takio Yoshizawa,Yoshinobu Nakamura,Frank T. Robb,Koki Horikoshi,Yaeko Masuchi,Hiroaki Shizuya,Hisasi Kikuchi +30 more
TL;DR: The complete sequence of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3, has been determined by assembling the sequences of the physical map-based contigs of fosmid clones and of long polymerase chain reaction (PCR) products which were used for gap-filling.
Journal ArticleDOI
Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1.
Yutaka Kawarabayasi,Yumi Hino,Hirosh Horikawa,Syuji Yamazaki,Yuji Haikawa,Koji Jin-no,Mikio Takahashi,Mitsuo Sekine,Sin-ichi Baba,Akiho Ankai,Hiroki Kosugi,Akira Hosoyama,Shigehiro Fukui,Yoshimi Nagai,Keiko Nishijima,Hidekazu Nakazawa,Minako Takamiya,Sayaka Masuda,Tomomichi Funahashi,Toshihiro Tanaka,Yutaka Kudoh,Jun Yamazaki,Norihiro Kushida,Akio Oguchi,Ken-ichi Aoki,Kenji Kubota,Yoshinobu Nakamura,Norimichi Nomura,Yoshihiko Sako,Hisasi Kikuchi +29 more
TL;DR: The complete sequence of the genome of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1, which optimally grows at 95 degrees C, has been determined by the whole genome shotgun method with some modifications.
Journal ArticleDOI
Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7.
Yutaka Kawarabayasi,Yumi Hino,Hiroshi Horikawa,Koji Jin-no,Mikio Takahashi,Mitsuo Sekine,Sin-ichi Baba,Akiho Ankai,Hiroki Kosugi,Akira Hosoyama,Shigehiro Fukui,Yoshimi Nagai,Keiko Nishijima,Rie Otsuka,Hidekazu Nakazawa,Minako Takamiya,Yumiko Kato,Takio Yoshizawa,Toshihiro Tanaka,Yutaka Kudoh,Jun Yamazaki,Norihiro Kushida,Akio Oguchi,Ken-ichi Aoki,Sayaka Masuda,Masao Yanagii,Masami Nishimura,Akihiko Yamagishi,Tairo Oshima,Hisasi Kikuchi +29 more
TL;DR: Sequence comparison provided evidence suggesting the integration of plasmid, rearrangement of genomic structure, and duplication of genomic regions that may be responsible for the larger genomic size of the S. tokodaii strain7 genome.
Journal ArticleDOI
Proteome Analysis of an Aerobic Hyperthermophilic Crenarchaeon, Aeropyrum pernix K1
Syuji Yamazaki,Jun Yamazaki,Keiko Nishijima,Rie Otsuka,Miyako Mise,Hanako Ishikawa,Kazumi Sasaki,Shin-ichi Tago,Katsumi Isono +8 more
TL;DR: The amino-terminal amino acid sequence analysis indicated that surprisingly the translation of 52% of their genes starts with TTG in contrast to ATG and GTG, and A. pernix K1 is the first example of an organism in which TTG is the most predominant translational initiation codon.
Journal ArticleDOI
An extracellular [NiFe] hydrogenase mediating iron corrosion is encoded in a genetically unstable genomic island in Methanococcus maripaludis
Hirohito Tsurumaru,Ito Naofumi,Koji Mori,Satoshi Wakai,Taku Uchiyama,Takao Iino,Akira Hosoyama,Hanako Ataku,Keiko Nishijima,Miyako Mise,Ai Shimizu,Takeshi Harada,Hiroshi Horikawa,Natsuko Ichikawa,Tomohiro Sekigawa,Koji Jin-no,Satoshi Tanikawa,Jun Yamazaki,Kazumi Sasaki,Syuji Yamazaki,Nobuyuki Fujita,Shigeaki Harayama +21 more
TL;DR: The identification of the MIC genes enables the development of molecular tools to monitor epidemiology, and to perform surveillance and risk assessment of MIC-inducing M. maripaludis.