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Igor Shabalov
Researcher at Lawrence Berkeley National Laboratory
Publications - 4
Citations - 2361
Igor Shabalov is an academic researcher from Lawrence Berkeley National Laboratory. The author has contributed to research in topics: Genomics & Genome. The author has an hindex of 4, co-authored 4 publications receiving 1909 citations. Previous affiliations of Igor Shabalov include Joint Genome Institute & United States Department of Energy.
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MycoCosm portal: gearing up for 1000 fungal genomes
Igor V. Grigoriev,Roman Nikitin,Sajeet Haridas,Alan Kuo,Robin A. Ohm,Robert Otillar,Robert Riley,Asaf Salamov,Xueling Zhao,Frank Korzeniewski,Tatyana Smirnova,Henrik P. Nordberg,Inna Dubchak,Igor Shabalov +13 more
TL;DR: MycoCosm is a fungal genomics portal developed by the US Department of Energy Joint Genome Institute to support integration, analysis and dissemination of fungal genome sequences and other 'omics' data by providing interactive web-based tools.
Journal ArticleDOI
The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
Henrik P. Nordberg,Michael D Cantor,Serge Dusheyko,Susan Z Hua,Alexander Poliakov,Igor Shabalov,Tatyana Smirnova,Igor V. Grigoriev,Inna Dubchak +8 more
TL;DR: Major updates of the Genome Portal in the past 2 years are described with a specific emphasis on efficient handling of the rapidly growing amount of diverse genomic data accumulated in JGI.
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The Genome Portal of the Department of Energy Joint Genome Institute
Igor V. Grigoriev,Henrik P. Nordberg,Igor Shabalov,Andrea Aerts,Michael N. Cantor,David Goodstein,Alan Kuo,Simon Minovitsky,Roman Nikitin,Robin A. Ohm,Robert Otillar,Alexander Poliakov,Igor Ratnere,Robert Riley,Tatyana Smirnova,Daniel S. Rokhsar,Inna Dubchak +16 more
TL;DR: The general organization of the JGI Genome Portal is described and the most recent addition, MycoCosm, a new integrated fungal genomics resource is described.
Journal ArticleDOI
PhycoCosm, a comparative algal genomics resource.
Igor V. Grigoriev,Igor V. Grigoriev,Richard D. Hayes,Sara Calhoun,Bishoy Kamel,Alice Wang,Alice Wang,Steven Ahrendt,Sergey Dusheyko,Roman Nikitin,Stephen J Mondo,Asaf Salamov,Igor Shabalov,Alan Kuo +13 more
TL;DR: PhycoCosm provides integration of genome sequence and annotation for >100 algal genomes with available multi-omics data and interactive web-based tools to enable algal research in bioenergy and the environment, encouraging community engagement and data exchange, and fostering new sequencing projects that will further these research goals.