J
J. Andrew Jones
Researcher at Rensselaer Polytechnic Institute
Publications - 27
Citations - 2165
J. Andrew Jones is an academic researcher from Rensselaer Polytechnic Institute. The author has contributed to research in topics: Metabolic engineering & Medicine. The author has an hindex of 18, co-authored 22 publications receiving 1677 citations. Previous affiliations of J. Andrew Jones include Hamilton College & Miami University.
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Journal ArticleDOI
Metabolic Burden: Cornerstones in Synthetic Biology and Metabolic Engineering Applications
TL;DR: This work discusses cell physiological responses to metabolic burdens, as well as strategies to identify and resolve the carbon and energy burden problems, including metabolic balancing, enhancing respiration, dynamic regulatory systems, chromosomal engineering, decoupling cell growth with production phases, and co- utilization of nutrient resources.
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Experimental and computational optimization of an Escherichia coli co-culture for the efficient production of flavonoids.
J. Andrew Jones,Victoria R. Vernacchio,Andrew Sinkoe,Shannon M. Collins,Mohammad H. A. Ibrahim,Daniel M. Lachance,Juergen Hahn,Mattheos A. G. Koffas +7 more
TL;DR: This study presents an Escherichia coli co-culture for the efficient production of flavonoids in vivo, resulting in a 970-fold improvement in titer of flavan-3-ols over previously published monoculture production.
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Metabolic pathway balancing and its role in the production of biofuels and chemicals
TL;DR: This review highlights up-to-date case studies using commonly used tools and universalized methodologies for metabolic pathway balancing and optimization, and examines their potential and importance for production of compounds such as fatty acids, alcohols, and high value chemicals.
Journal ArticleDOI
Complete Biosynthesis of Anthocyanins Using E. coli Polycultures.
J. Andrew Jones,J. Andrew Jones,Victoria R. Vernacchio,Shannon M. Collins,Abhijit N. Shirke,Yu Xiu,Yu Xiu,Yu Xiu,Jacob A. Englaender,Brady F. Cress,Catherine C. McCutcheon,Robert J. Linhardt,Richard A. Gross,Mattheos A. G. Koffas +13 more
TL;DR: This work engineer for the first time the complex microbial biosynthesis of an anthocyanin plant natural product, starting from sugar, through the development of a synthetic, 4-strain Escherichia coli polyculture collectively expressing 15 exogenous or modified pathway enzymes from diverse plants and other microbes.
Journal ArticleDOI
Engineering the biological conversion of methanol to specialty chemicals in Escherichia coli.
W. Brian Whitaker,W. Brian Whitaker,J. Andrew Jones,J. Andrew Jones,R. Kyle Bennett,R. Kyle Bennett,Jacqueline E. Gonzalez,Victoria R. Vernacchio,Shannon M. Collins,Michael A. Palmer,Samuel Schmidt,Maciek R. Antoniewicz,Mattheos A. G. Koffas,Eleftherios T. Papoutsakis,Eleftherios T. Papoutsakis +14 more
TL;DR: By incorporating the pathway to synthesize the flavanone naringenin, the first example of in vivo conversion of methanol into a specialty chemical in E. coli is demonstrated, demonstrating a cycling RuMP pathway for meethanol assimilation to support growth.