J
Jennifer Dommer
Researcher at National Institutes of Health
Publications - 7
Citations - 2660
Jennifer Dommer is an academic researcher from National Institutes of Health. The author has contributed to research in topics: PlasmoDB & Genome. The author has an hindex of 5, co-authored 7 publications receiving 2385 citations. Previous affiliations of Jennifer Dommer include New York University & University of Georgia.
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Journal ArticleDOI
PlasmoDB: a functional genomic database for malaria parasites
Cristina Aurrecoechea,John Brestelli,Brian P. Brunk,Jennifer Dommer,Steve Fischer,Bindu Gajria,Xin Gao,Alan R. Gingle,Gregory R. Grant,Omar S. Harb,Mark Heiges,Frank Innamorato,John Iodice,Jessica C. Kissinger,Eileen Kraemer,Wei Li,John A. Miller,Vishal Nayak,Cary Pennington,Deborah F. Pinney,David S. Roos,Chris Ross,Christian J. Stoeckert,Charles Treatman,Haiming Wang +24 more
TL;DR: PlasmoDB as mentioned in this paper is a functional genomic database for Plasmodium spp. that provides a resource for data analysis and visualization in a gene-by-gene or genome-wide scale.
Wang H: PlasmoDB: a functional genomic database for malaria parasites
Cristina Aurrecoechea,John Brestelli,Brian P. Brunk,Jennifer Dommer,Steve Fischer,Bindu Gajria,Xin Gao,Alan R. Gingle,Greg Grant,Omar S. Harb,Mark Heiges,Frank Innamorato,John Iodice,Jessica C. Kissinger,Eileen Kraemer,Wei Li,John A. Miller,Vishal Nayak,Cary Pennington,Deborah F. Pinney,David S. Roos,Chris Ross,Christian J. Stoeckert,Charles Treatman,Haiming Wang +24 more
TL;DR: The latest release, PlasmoDB 5.5, contains numerous new data types from several broad categories—annotated genomes, evidence of transcription, proteomics evidence, protein function evidence, population biology and evolution.
Journal ArticleDOI
ToxoDB: an integrated Toxoplasma gondii database resource.
Bindu Gajria,Amit Bahl,John Brestelli,Jennifer Dommer,Steve Fischer,Xin Gao,Mark Heiges,John Iodice,Jessica C. Kissinger,Aaron J. Mackey,Deborah F. Pinney,David S. Roos,Christian J. Stoeckert,Haiming Wang,Brian P. Brunk +14 more
TL;DR: ToxoDB has matured significantly since its initial release and the numerous updates with respect to the data and increased functionality available on the website are outlined.
Journal ArticleDOI
GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis
Cristina Aurrecoechea,John Brestelli,Brian P. Brunk,Jane M. Carlton,Jennifer Dommer,Steve Fischer,Bindu Gajria,Xin Gao,Alan R. Gingle,Gregory R. Grant,Omar S. Harb,Mark Heiges,Frank Innamorato,John Iodice,Jessica C. Kissinger,Eileen Kraemer,Wei Li,John A. Miller,Hilary G. Morrison,Vishal Nayak,Cary Pennington,Deborah F. Pinney,David S. Roos,Chris Ross,Christian J. Stoeckert,Steven A. Sullivan,Charles Treatman,Haiming Wang +27 more
TL;DR: The ability to combine the results from independent queries, and to store queries and query results for future use facilitates complex, genome-wide mining of functional genomic data.
Journal ArticleDOI
Nephele: a cloud platform for simplified, standardized and reproducible microbiome data analysis.
Nick Weber,David Liou,Jennifer Dommer,Philip Macmenamin,Mariam Quinones,Ian Misner,Andrew J. Oler,Joe Wan,Lewis Kim,Meghan Coakley McCarthy,Samuel Ezeji,Karlynn Noble,Darrell E. Hurt +12 more
TL;DR: The National Institute of Allergy and Infectious Diseases (NIAID) has created Nephele, a cloud‐based microbiome data analysis platform with standardized pipelines and a simple web interface for transforming raw data into biological insights.