J
Julia Borden
Researcher at University of California, Berkeley
Publications - 11
Citations - 75
Julia Borden is an academic researcher from University of California, Berkeley. The author has contributed to research in topics: Chemistry & Biology. The author has an hindex of 3, co-authored 3 publications receiving 17 citations.
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Journal ArticleDOI
Engineering complex communities by directed evolution.
Chang-Yu Chang,Jean C. C. Vila,Madeline Bender,Richard Li,Madeleine C. Mankowski,Molly Bassette,Julia Borden,Stefan Golfier,Paul Gerald L. Sanchez,Rachel Waymack,Xinwen Zhu,Juan Diaz-Colunga,Sylvie Estrela,María Rebolleda-Gómez,Alvaro Sanchez +14 more
TL;DR: In this article, a flexible modelling framework is developed to systematically probe any arbitrary selection strategy on any arbitrary set of communities and selected functions, and a range of alternative directed evolution strategies that are well suited for the top-down engineering of large, diverse and stable microbial consortia.
Journal ArticleDOI
New discoveries expand possibilities for carboxysome engineering.
Julia Borden,David F. Savage +1 more
TL;DR: Carboxysomes are CO2-fixing protein compartments present in all cyanobacteria and some proteobacteria as mentioned in this paper, and are attractive candidates for carbon assimilation bioengineering because they concentrate carbon, allowing the fixation reaction to occur near its maximum rate, and because they self-assemble in diverse organisms with a set of standard biological parts.
Posted ContentDOI
Top-down engineering of complex communities by directed evolution
Chang-Yu Chang,Jean C. C. Vila,Madeline Bender,Richard Li,Madeleine C. Mankowski,Molly Bassette,Julia Borden,Stefan Golfier,Paul Gerald L. Sanchez,Rachel Waymack,Xinwen Zhu,Juan Diaz-Colunga,Sylvie Estrela,María Rebolleda-Gómez,Alvaro Sanchez +14 more
TL;DR: This work examines the fundamental limits of the two main breeding methods used so far, and identifies a range of directed evolution strategies that are better suited for the top-down engineering of large, diverse, and stable microbial consortia.
Posted ContentDOI
Ratiometric Sensing of Redox Environments Inside Individual Carboxysomes Trapped in Solution
William B. Carpenter,Abhijit A. Lavania,Julia Borden,Luke M. Oltrogge,Davis D. Perez,Peter D. Dahlberg,David F. Savage,W. E. Moerner +7 more
TL;DR: In this paper , an improved ISABEL trap was proposed that incorporates a near-infrared scatter illumination beam and rapidly interleaves 405 and 488 nm fluorescence excitation reporter beams.
Journal ArticleDOI
Exploring Masses and Internal Mass Distributions of Single Carboxysomes in Free Solution Using Fluorescence and Interferometric Scattering in an Anti-Brownian Trap
Abhijit A. Lavania,William B. Carpenter,Luke M. Oltrogge,Davis D. Perez,Julia Borden,David F. Savage,W. E. Moerner +6 more
TL;DR: In this paper , an improved Interferometric Scattering Anti-Brownian ELectrokinetic (ISABEL) trap is proposed to track the position of a single nanoparticle via its scattering of a near-infrared beam and applies feedback to counteract its Brownian motion.