L
Lauren Miller
Researcher at University of Washington
Publications - 7
Citations - 706
Lauren Miller is an academic researcher from University of Washington. The author has contributed to research in topics: Ectodomain & Protein design. The author has an hindex of 3, co-authored 6 publications receiving 283 citations.
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Journal ArticleDOI
De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Longxing Cao,Inna Goreshnik,Brian Coventry,James Brett Case,Lauren Miller,Lisa Kozodoy,Rita E. Chen,Lauren Carter,Alexandra C. Walls,Young-Jun Park,Eva-Maria Strauch,Lance Stewart,Michael S. Diamond,David Veesler,David Baker +14 more
TL;DR: Targeting the interaction between the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike protein and the human angiotensin-converting enzyme 2 (ACE2) receptor is a promising therapeutic strategy and small, stable proteins that bind tightly to the spike and block it from binding to ACE2 are designed.
Journal ArticleDOI
Design of protein-binding proteins from the target structure alone
Longxing Cao,Brian Coventry,Inna Goreshnik,Buwei Huang,William Sheffler,Joon-Sung Park,Kevin Jude,Ivanka Markovic,Rameshwar U. Kadam,Koen H. G. Verschueren,Kenneth Verstraete,Scott T. R. Walsh,N. Bennett,Ashish Phal,Aerin Yang,Lisa Kozodoy,Michelle DeWitt,Lora K. Picton,Lauren Miller,Eva-Maria Strauch,Nic Debouver,Allison Pires,Asim K. Bera,Samer Halabiya,Bradley Hammerson,Wei Yang,Steffen M. Bernard,Lance Stewart,Ian A. Wilson,Hannele Ruohola-Baker,Joseph Schlessinger,Sangwon Lee,Savvas N. Savvides,K. Christopher Garcia,David Baker +34 more
TL;DR: In this article , the authors describe a general solution to this problem that starts with a broad exploration of the vast space of possible binding modes to a selected region of a protein surface and then intensifies the search in the vicinity of the most promising binding modes.
Journal ArticleDOI
Control of creatine metabolism by HIF is an endogenous mechanism of barrier regulation in colitis
Louise E. Glover,Brittelle E. Bowers,Bejan Saeedi,Stefan F. Ehrentraut,Eric L. Campbell,Amanda J. Bayless,Evgenia Dobrinskikh,Agnieszka A. Kendrick,Caleb J. Kelly,Adrianne Burgess,Lauren Miller,Douglas J. Kominsky,Paul Jedlicka,Sean P. Colgan +13 more
TL;DR: It is demonstrated that genes involved in creatine metabolism, the creatine kinases (CKs), are coordinately regulated by hypoxia-inducible transcription factors (HIFs) and that such regulation is critical to barrier function.
Posted ContentDOI
De novo design of picomolar SARS-CoV-2 miniprotein inhibitors
Longxing Cao,Inna Goreshnik,Brian Coventry,James Brett Case,Lauren Miller,Lisa Kozodoy,Rita E. Chen,Lauren Carter,Lexi Walls,Young-Jun Park,Lance Stewart,Michael S. Diamond,David Veesler,David Baker,David Baker +14 more
TL;DR: Cryo-electron microscopy structures of the designs and their binding interactions with the RBD are nearly identical to the computational models, and that all three RBDs in a single Spike protein can be engaged simultaneously.
Posted ContentDOI
Robust de novo design of protein binding proteins from target structural information alone
Longxing Cao,Brian Coventry,Inna Goreshnik,Buwei Huang,Joon Sung Park,Kevin Jude,Iva Marković,Rameshwar U. Kadam,K. Verschueren,Kenneth Verstraete,Scott T. R. Walsh,Nathaniel Bennett,Ashish Phal,Aerin Yang,Lisa Kozodoy,Michelle DeWitt,Lora Picton,Lauren Miller,Eva-Maria Strauch,Samer Halabiya,Bradley Hammerson,Wei Yang,Steffen Benard,Lance Stewart,Ian A. Wilson,Hannele Ruohola-Baker,Joseph Schlessinger,Sangwon Lee,Savvas N. Savvides,K. Christopher Garcia,David Baker,David Baker +31 more
TL;DR: In this paper, a general solution to the problem of protein-protein interaction design is described, which starts with a broad exploration of the very large space of possible binding modes and interactions, and then intensifies the search in the most promising regions.