L
Lee Sam
Researcher at University of Michigan
Publications - 4
Citations - 3854
Lee Sam is an academic researcher from University of Michigan. The author has contributed to research in topics: Fusion gene & Cancer. The author has an hindex of 4, co-authored 4 publications receiving 3499 citations.
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Journal ArticleDOI
The mutational landscape of lethal castration-resistant prostate cancer
Catherine S. Grasso,Yi-Mi Wu,Dan R. Robinson,Xuhong Cao,Saravana M. Dhanasekaran,Amjad Khan,Michael J. Quist,Xiaojun Jing,Robert J. Lonigro,J. Chad Brenner,Irfan A. Asangani,Bushra Ateeq,Sang Y. Chun,Javed Siddiqui,Lee Sam,Matt Anstett,Rohit Mehra,John R. Prensner,Nallasivam Palanisamy,Gregory A. Ryslik,Fabio Vandin,Benjamin J. Raphael,Lakshmi P. Kunju,Daniel R. Rhodes,Kenneth J. Pienta,Arul M. Chinnaiyan,Scott A. Tomlins +26 more
TL;DR: The mutational landscape of a heavily treated metastatic cancer is described, novel mechanisms of AR signalling deregulated in prostate cancer are identified, and candidates for future study are prioritize.
Journal ArticleDOI
Transcriptome Sequencing to Detect Gene Fusions in Cancer
Christopher G. Maher,Chandan Kumar-Sinha,Xuhong Cao,Shanker Kalyana-Sundaram,Bo Han,Xiaojun Jing,Lee Sam,Terrence R. Barrette,Nallasivam Palanisamy,Arul M. Chinnaiyan +9 more
TL;DR: A robust pipeline is established for the discovery of novel gene chimaeras using high-throughput sequencing of cancer cells to discover novel gene fusions resulting in chimaeric transcripts in cancer cell lines and tumours.
Journal ArticleDOI
Personalized Oncology Through Integrative High-Throughput Sequencing: A Pilot Study
Sameek Roychowdhury,Matthew K. Iyer,Dan R. Robinson,Robert J. Lonigro,Yi-Mi Wu,Xuhong Cao,Shanker Kalyana-Sundaram,Shanker Kalyana-Sundaram,Lee Sam,O. Alejandro Balbin,Michael J. Quist,Terrence R. Barrette,Jessica Everett,Javed Siddiqui,Lakshmi P. Kunju,Nora M. Navone,John C. Araujo,Patricia Troncoso,Christopher J. Logothetis,Jeffrey W. Innis,David Smith,Christopher D. Lao,Scott Y. H. Kim,J. Scott Roberts,Stephen B. Gruber,Kenneth J. Pienta,Moshe Talpaz,Arul M. Chinnaiyan +27 more
TL;DR: The mutations present in advanced cancers can be identified by integrative high-throughput sequencing to enable biomarker-driven clinical trials and, ultimately, treatment and the authors tested this approach by extensively characterizing cancers in several patients and then convening a Sequencing Tumor Board of experts to determine the appropriate treatment.
Journal ArticleDOI
Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer
Jung H. Kim,Saravana M. Dhanasekaran,John R. Prensner,Xuhong Cao,Dan R. Robinson,Shanker Kalyana-Sundaram,Shanker Kalyana-Sundaram,Christina Huang,Sunita Shankar,Xiaojun Jing,Matthew K. Iyer,Ming Hu,Ming Hu,Lee Sam,Catherine S. Grasso,Christopher G. Maher,Nallasivam Palanisamy,Rohit Mehra,Hal D. Kominsky,Javed Siddiqui,Jindan Yu,Zhaohui S. Qin,Arul M. Chinnaiyan +22 more
TL;DR: This comprehensive methylome map will further the understanding of epigenetic regulation in prostate cancer progression and observed differences in repeat element methylation, particularly LINE-1, between ERG gene fusion-positive and -negative cancers.