The increasing volume of data in modern business and science calls for more complex and sophisticated tools. Although advances in data mining technology have made extensive data collection much easier, it's still always evolving and there is a constant need for new techniques and tools that can help us transform this data into useful information and knowledge. Since the previous edition's publication, great advances have been made in the field of data mining. Not only does the third of edition of Data Mining: Concepts and Techniques continue the tradition of equipping you with an understanding and application of the theory and practice of discovering patterns hidden in large data sets, it also focuses on new, important topics in the field: data warehouses and data cube technology, mining stream, mining social networks, and mining spatial, multimedia and other complex data. Each chapter is a stand-alone guide to a critical topic, presenting proven algorithms and sound implementations ready to be used directly or with strategic modification against live data. This is the resource you need if you want to apply today's most powerful data mining techniques to meet real business challenges. * Presents dozens of algorithms and implementation examples, all in pseudo-code and suitable for use in real-world, large-scale data mining projects. * Addresses advanced topics such as mining object-relational databases, spatial databases, multimedia databases, time-series databases, text databases, the World Wide Web, and applications in several fields. *Provides a comprehensive, practical look at the concepts and techniques you need to get the most out of real business data

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Data Mining: Concepts and Techniques

An approach to the construction of classifiers from imbalanced datasets is described. A dataset is imbalanced if the classification categories are not approximately equally represented. Often real-world data sets are predominately composed of "normal" examples with only a small percentage of "abnormal" or "interesting" examples. It is also the case that the cost of misclassifying an abnormal (interesting) example as a normal example is often much higher than the cost of the reverse error. Under-sampling of the majority (normal) class has been proposed as a good means of increasing the sensitivity of a classifier to the minority class. This paper shows that a combination of our method of oversampling the minority (abnormal)cla ss and under-sampling the majority (normal) class can achieve better classifier performance (in ROC space)tha n only under-sampling the majority class. This paper also shows that a combination of our method of over-sampling the minority class and under-sampling the majority class can achieve better classifier performance (in ROC space)t han varying the loss ratios in Ripper or class priors in Naive Bayes. Our method of over-sampling the minority class involves creating synthetic minority class examples. Experiments are performed using C4.5, Ripper and a Naive Bayes classifier. The method is evaluated using the area under the Receiver Operating Characteristic curve (AUC)and the ROC convex hull strategy.

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SMOTE: synthetic minority over-sampling technique

The Ribosomal Database Project (RDP) Classifier, a naive Bayesian classifier, can rapidly and accurately classify bacterial 16S rRNA sequences into the new higher-order taxonomy proposed in Bergey's Taxonomic Outline of the Prokaryotes (2nd ed., release 5.0, Springer-Verlag, New York, NY, 2004). It provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. The majority of classifications (98%) were of high estimated confidence (≥95%) and high accuracy (98%). In addition to being tested with the corpus of 5,014 type strain sequences from Bergey's outline, the RDP Classifier was tested with a corpus of 23,095 rRNA sequences as assigned by the NCBI into their alternative higher-order taxonomy. The results from leave-one-out testing on both corpora show that the overall accuracies at all levels of confidence for near-full-length and 400-base segments were 89% or above down to the genus level, and the majority of the classification errors appear to be due to anomalies in the current taxonomies. For shorter rRNA segments, such as those that might be generated by pyrosequencing, the error rate varied greatly over the length of the 16S rRNA gene, with segments around the V2 and V4 variable regions giving the lowest error rates. The RDP Classifier is suitable both for the analysis of single rRNA sequences and for the analysis of libraries of thousands of sequences. Another related tool, RDP Library Compare, was developed to facilitate microbial-community comparison based on 16S rRNA gene sequence libraries. It combines the RDP Classifier with a statistical test to flag taxa differentially represented between samples. The RDP Classifier and RDP Library Compare are available online at http://rdp.cme.msu.edu/.

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Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

Machine Learning is the study of methods for programming computers to learn. Computers are applied to a wide range of tasks, and for most of these it is relatively easy for programmers to design and implement the necessary software. However, there are many tasks for which this is difficult or impossible. These can be divided into four general categories. First, there are problems for which there exist no human experts. For example, in modern automated manufacturing facilities, there is a need to predict machine failures before they occur by analyzing sensor readings. Because the machines are new, there are no human experts who can be interviewed by a programmer to provide the knowledge necessary to build a computer system. A machine learning system can study recorded data and subsequent machine failures and learn prediction rules. Second, there are problems where human experts exist, but where they are unable to explain their expertise. This is the case in many perceptual tasks, such as speech recognition, hand-writing recognition, and natural language understanding. Virtually all humans exhibit expert-level abilities on these tasks, but none of them can describe the detailed steps that they follow as they perform them. Fortunately, humans can provide machines with examples of the inputs and correct outputs for these tasks, so machine learning algorithms can learn to map the inputs to the outputs. Third, there are problems where phenomena are changing rapidly. In finance, for example, people would like to predict the future behavior of the stock market, of consumer purchases, or of exchange rates. These behaviors change frequently, so that even if a programmer could construct a good predictive computer program, it would need to be rewritten frequently. A learning program can relieve the programmer of this burden by constantly modifying and tuning a set of learned prediction rules. Fourth, there are applications that need to be customized for each computer user separately. Consider, for example, a program to filter unwanted electronic mail messages. Different users will need different filters. It is unreasonable to expect each user to program his or her own rules, and it is infeasible to provide every user with a software engineer to keep the rules up-to-date. A machine learning system can learn which mail messages the user rejects and maintain the filtering rules automatically. Machine learning addresses many of the same research questions as the fields of statistics, data mining, and psychology, but with differences of emphasis. Statistics focuses on understanding the phenomena that have generated the data, often with the goal of testing different hypotheses about those phenomena. Data mining seeks to find patterns in the data that are understandable by people. Psychological studies of human learning aspire to understand the mechanisms underlying the various learning behaviors exhibited by people (concept learning, skill acquisition, strategy change, etc.).

Machine learning

An approach to the construction of classifiers from imbalanced datasets is described. A dataset is imbalanced if the classification categories are not approximately equally represented. Often real-world data sets are predominately composed of "normal" examples with only a small percentage of "abnormal" or "interesting" examples. It is also the case that the cost of misclassifying an abnormal (interesting) example as a normal example is often much higher than the cost of the reverse error. Under-sampling of the majority (normal) class has been proposed as a good means of increasing the sensitivity of a classifier to the minority class. This paper shows that a combination of our method of over-sampling the minority (abnormal) class and under-sampling the majority (normal) class can achieve better classifier performance (in ROC space) than only under-sampling the majority class. This paper also shows that a combination of our method of over-sampling the minority class and under-sampling the majority class can achieve better classifier performance (in ROC space) than varying the loss ratios in Ripper or class priors in Naive Bayes. Our method of over-sampling the minority class involves creating synthetic minority class examples. Experiments are performed using C4.5, Ripper and a Naive Bayes classifier. The method is evaluated using the area under the Receiver Operating Characteristic curve (AUC) and the ROC convex hull strategy.

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SMOTE: Synthetic Minority Over-sampling Technique

There has been much recent interest in retrieval of time series data. Earlier work has used a fixed similarity metric (e.g., Euclidean distance) to determine the similarity between a userspecified query and items in the database. Here, we describe a novel approach to retrieval of time series data by using relevance feedback from the user to adjust the similarity metric. This is important because the Euclidean distance metric does not capture many notions of similarity between time series. In particular, Euclidean distance is sensitive to various “distortions” such as offset translation, amplitude scaling, etc. Depending on the domain and the user, one may wish a query to be sensitive or insensitive to these distortions to varying degrees. This paper addresses this problem by introducing a profile that encodes the user's subjective notion of similarity in a domain. These profiles can be learned continuously from interaction with the user. We further show how the user profile may be embedded in a system that uses relevance feedback to modify the query in a manner analogous to the familiar text retrieval algorithms.

Relevance feedback retrieval of time series data

In this paper, we discuss a prototype application deployed at the U.S. National Science Foundation for assisting program directors in identifying reviewers for proposals. The application helps program directors sort proposals into panels and find reviewers for proposals. To accomplish these tasks, it extracts information from the full text of proposals both to learn about the topics of proposals and the expertise of reviewers. We discuss a variety of alternatives that were explored, the solution that was implemented, and the experience in using the solution within the workflow of NSF.

Mining for proposal reviewers: lessons learned at the national science foundation

The goal of combining the predictions of multiple learned models is to form an improved estimator. A combining strategy must be able to robustly handle the inherent correlation, or multicollinearity, of the learned models while identifying the unique contributions of each. A progression of existing approaches and their limitations with respect to these two issues are discussed. A new approach, PCRa, based on principal components regression is proposed to address these limitations. An evaluation of the new approach on a collection of domains reveals that (1) PCRa was the most robust combining method, (2) correlation could be handled without eliminating any of the learned models, and (3) the principal components of the learned models provided a continuum of “regularized” weights from which PCRa could choose.

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A Principal Components Approach to Combining Regression Estimates

We discuss an approach to constructing composite features during the induction of decision trees. The composite features correspond to m-of-n concepts. There are three goals of this research. First, we explore a family of greedy methods for building m-of-n concepts (one of which, GS, is described in this paper). Second, we show how these concepts can be formed as internal nodes of decision trees, serving as a bias to the learner. Finally, we evaluate the method on several artificially generated and naturally occurring data sets to determine the effects of this bias.

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ID2-of-3: Constructive Induction of M-of-N Concepts for Discriminators in Decision Trees

Constructive induction is the process of changing the representation of examples by creating new attributes from existing attributes. In classification, the goal of constructive induction is to find a representation that facilitates learning a concept description by a particular learning system. Typically, the new attributes are Boolean or arithmetic combinations of existing attributes and the learning algorithms used are decision trees or rule learners. We describe the construction of new attributes that are the Cartesian product of existing attributes. We consider the effects of this operator on three learning algorithms and compare two different methods for determining when to construct new attributes with this operator

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Michael J. Pazzani

Papers

Relevance feedback retrieval of time series data

Mining for proposal reviewers: lessons learned at the national science foundation

A Principal Components Approach to Combining Regression Estimates

ID2-of-3: Constructive Induction of M-of-N Concepts for Discriminators in Decision Trees

Constructive Induction of Cartesian Product Attributes