I have developed "tennis elbow" from lugging this book around the past four weeks, but it is worth the pain, the effort, and the aspirin. It is also worth the (relatively speaking) bargain price. Including appendixes, this book contains 894 pages of text. The entire panorama of the neural sciences is surveyed and examined, and it is comprehensive in its scope, from genomes to social behaviors. The editors explicitly state that the book is designed as "an introductory text for students of biology, behavior, and medicine," but it is hard to imagine any audience, interested in any fragment of neuroscience at any level of sophistication, that would not enjoy this book. The editors have done a masterful job of weaving together the biologic, the behavioral, and the clinical sciences into a single tapestry in which everyone from the molecular biologist to the practicing psychiatrist can find and appreciate his or

Principles of Neural Science

Level Set Methods and Fast Marching Methods: Evolving Interfaces in Computational Geometry, Fluid Mechanics, Computer Vision, and Materials Science (2nd edition)

N G van Kampen 1981 Amsterdam: North-Holland xiv + 419 pp price Dfl 180 This is a book which, at a lower price, could be expected to become an essential part of the library of every physical scientist concerned with problems involving fluctuations and stochastic processes, as well as those who just enjoy a beautifully written book. It provides an extensive graduate-level introduction which is clear, cautious, interesting and readable.

https://iopscience.iop.org/article/10.1088/0031-9112/34/4/040/pdf

Stochastic Processes in Physics and Chemistry

From the Publisher: 
The accessible presentation of this book gives both a general view of the entire computer vision enterprise and also offers sufficient detail to be able to build useful applications. Users learn techniques that have proven to be useful by first-hand experience and a wide range of mathematical methods. A CD-ROM with every copy of the text contains source code for programming practice, color images, and illustrative movies. Comprehensive and up-to-date, this book includes essential topics that either reflect practical significance or are of theoretical importance. Topics are discussed in substantial and increasing depth. Application surveys describe numerous important application areas such as image based rendering and digital libraries. Many important algorithms broken down and illustrated in pseudo code. Appropriate for use by engineers as a comprehensive reference to the computer vision enterprise.

Computer vision : a modern approach = 计算机视觉 : 一种现代的方法

Preface Through many centuries physics has been one of the most fruitful sources of inspiration for mathematics. As a consequence, mathematics has become an economic language providing a few basic principles which allow to explain a large variety of physical phenomena. Many of them are described in terms of partial diierential equations (PDEs). In recent years, however, mathematics also has been stimulated by other novel elds such as image processing. Goals like image segmentation, multiscale image representation, or image restoration cause a lot of challenging mathematical questions. Nevertheless, these problems frequently have been tackled with a pool of heuristical recipes. Since the treatment of digital images requires very much computing power, these methods had to be fairly simple. With the tremendous advances in computer technology in the last decade, it has become possible to apply more sophisticated techniques such as PDE-based methods which have been inspired by physical processes. Among these techniques, parabolic PDEs have found a lot of attention for smoothing and restoration purposes, see e.g. 113]. To restore images these equations frequently arise from gradient descent methods applied to variational problems. Image smoothing by parabolic PDEs is closely related to the scale-space concept where one embeds the original image into a family of subsequently simpler , more global representations of it. This idea plays a fundamental role for extracting semantically important information. The pioneering work of Alvarez, Guichard, Lions and Morel 11] has demonstrated that all scale-spaces fulllling a few fairly natural axioms are governed by parabolic PDEs with the original image as initial condition. Within this framework, two classes can be justiied in a rigorous way as scale-spaces: the linear diiusion equation with constant dif-fusivity and nonlinear so-called morphological PDEs. All these methods satisfy a monotony axiom as smoothing requirement which states that, if one image is brighter than another, then this order is preserved during the entire scale-space evolution. An interesting class of parabolic equations which pursue both scale-space and restoration intentions is given by nonlinear diiusion lters. Methods of this type have been proposed for the rst time by Perona and Malik in 1987 190]. In v vi PREFACE order to smooth the image and to simultaneously enhance semantically important features such as edges, they apply a diiusion process whose diiusivity is steered by local image properties. These lters are diicult to analyse mathematically , as they may act locally like a backward diiusion process. …

/pdf/anisotropic-diffusion-in-image-processing-z13u09qvsm.pdf

Anisotropic diffusion in image processing

In our previous work we showed the ability to improve the optical system's matrix condition by optical design, thereby improving its robustness to noise. It was shown that by using singular value decomposition, a target point-spread function (PSF) matrix can be defined for an auxiliary optical system, which works parallel to the original system to achieve such an improvement. In this paper, after briefly introducing the all optics implementation of the auxiliary system, we show a method to decompose the target PSF matrix. This is done through a series of shifted responses of auxiliary optics (named trajectories), where a complicated hardware filter is replaced by postprocessing. This process manipulates the pixel confined PSF response of simple auxiliary optics, which in turn creates an auxiliary system with the required PSF matrix. This method is simulated on two space variant systems and reduces their system condition number from 18,598 to 197 and from 87,640 to 5.75, respectively. We perform a study of the latter result and show significant improvement in image restoration performance, in comparison to a system without auxiliary optics and to other previously suggested hybrid solutions. Image restoration results show that in a range of low signal-to-noise ratio values, the trajectories method gives a significant advantage over alternative approaches. A third space invariant study case is explored only briefly, and we present a significant improvement in the matrix condition number from 1.9160e+013 to 34,526.

Trajectories in parallel optics

Unravelling underlying complex structures from limited resolution measurements is a known problem arising in many scientific disciplines. We study a stochastic dynamical model with a multiplicative noise. It consists of a stochastic differential equation living on a graph, similar to approaches used in population dynamics or directed polymers in random media. We develop a new tool for approximation of correlation functions based on spectral analysis that does not require translation invariance. This enables us to go beyond lattices and analyse general networks. We show, analytically, that this general model has different phases depending on the topology of the network. One of the main parameters which describe the network topology is the spectral dimension $$\tilde{{\boldsymbol{d}}}$$
 . We show that the correlation functions depend on the spectral dimension and that only for $$\tilde{{\boldsymbol{d}}}$$
  > 2 a dynamical phase transition occurs. We show by simulation how the system behaves for different network topologies, by defining and calculating the Lyapunov exponents on the graph. We present an application of this model in the context of Magnetic Resonance (MR) measurements of porous structure such as brain tissue. This model can also be interpreted as a KPZ equation on a graph.

/pdf/spectral-analysis-of-a-non-equilibrium-stochastic-dynamics-ly54k4fptl.pdf

Spectral Analysis of a Non-Equilibrium Stochastic Dynamics on a General Network

We present a novel method for segmentation of anatomical structures in histological data. Segmentation is carried out slice-by-slice where the successful segmentation of one section provides a prior for the subsequent one. Intensities and spatial locations of the region of interest and the background are modeled by three-dimensional Gaussian mixtures. This information adaptively propagates across the sections. Segmentation is inferred by minimizing a cost functional that enforces the compatibility of the partitions with the corresponding models together with the alignment of the boundaries with the image gradients. The algorithm is demonstrated on histological images of mouse brain. The segmentation results compare well with manual segmentation.

Propagating distributions for segmentation of brain atlas

We introduce a new geometrical framework for image processing. This framework finds a seamless link between the TV-L/sub 1/ and the L/sub 2/ norms that are often used in image processing, based on the geometry of the image and its interpretation as a surface. It unifies most of the current "scale space" models for images by a simple selection of one parameter, yet more important, it enables one to introduce new methods to deal with images in a simple and natural way. A functional called "Polyakov (1981) action", borrowed from high energy physics, is shown to be useful for image enhancement in color, texture, volumetric medical data, movies, and more.

Images as embedding maps and minimal surfaces: a unified approach for image diffusion

In this work, we explore the ability of NN (Neural Networks) to serve as a tool for finding eigen-pairs of ordinary differential equations. The question we aime to address is whether, given a self-adjoint operator, we can learn what are the eigenfunctions, and their matching eigenvalues. The topic of solving the eigen-problem is widely discussed in Image Processing, as many image processing algorithms can be thought of as such operators. We suggest an alternative to numeric methods of finding eigenpairs, which may potentially be more robust and have the ability to solve more complex problems. In this work, we focus on simple problems for which the analytical solution is known. This way, we are able to make initial steps in discovering the capabilities and shortcomings of DNN (Deep Neural Networks) in the given setting.

Nir Sochen

Papers

Trajectories in parallel optics

Spectral Analysis of a Non-Equilibrium Stochastic Dynamics on a General Network

Propagating distributions for segmentation of brain atlas

Images as embedding maps and minimal surfaces: a unified approach for image diffusion

Solving the functional Eigen-Problem using Neural Networks.