S
Shota Nakade
Researcher at Hiroshima University
Publications - 13
Citations - 1203
Shota Nakade is an academic researcher from Hiroshima University. The author has contributed to research in topics: Genome editing & CRISPR. The author has an hindex of 8, co-authored 11 publications receiving 977 citations.
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Journal ArticleDOI
Microhomology-mediated end-joining-dependent integration of donor DNA in cells and animals using TALENs and CRISPR/Cas9.
Shota Nakade,Takuya Tsubota,Yuto Sakane,Satoshi Kume,Naoaki Sakamoto,Masanobu Obara,Takaaki Daimon,Hideki Sezutsu,Takashi Yamamoto,Tetsushi Sakuma,Ken-ichi T. Suzuki +10 more
TL;DR: It is demonstrated that CRISPR/Cas9-mediated PITCh, termed CRIS-PITCh, can be applied in human cells without carrying the plasmid backbone sequence and will be useful for a variety of applications, not only in cultured cells, but also in various organisms, including invertebrates and vertebrates.
Journal ArticleDOI
MMEJ-assisted gene knock-in using TALENs and CRISPR-Cas9 with the PITCh systems
TL;DR: A streamlined protocol for PITCh knock-in is described, including the design and construction of the PITCh vectors, and their delivery to either human cell lines by transfection or to frog embryos by microinjection.
Journal ArticleDOI
Precise in-frame integration of exogenous DNA mediated by CRISPR/Cas9 system in zebrafish
Yu Hisano,Tetsushi Sakuma,Shota Nakade,Rie Ohga,Satoshi Ota,Hitoshi Okamoto,Takashi Yamamoto,Atsuo Kawahara +7 more
TL;DR: Efficient, precise CRISPR/Cas9-mediated integration using a donor vector harbouring short homologous sequences flanking the genomic target locus enables precise targeted gene knock-in in zebrafish.
Journal ArticleDOI
Cas9, Cpf1 and C2c1/2/3―What's next?
TL;DR: Various improvements and alternatives of CRISPR-Cas systems are described, including engineered Cas9 variants, Cas9 homologs, and novel Cas proteins other than Cas9 that enable flexible genome engineering with high efficiency and specificity, orthogonal genetic control at multiple gene loci, gene knockdown, or fluorescence imaging of transcripts mediated by RNA targeting, and beyond.
Journal ArticleDOI
Gene cassette knock-in in mammalian cells and zygotes by enhanced MMEJ
Tomomi Aida,Tomomi Aida,Shota Nakade,Tetsushi Sakuma,Yayoi Izu,Ayu Oishi,Ayu Oishi,Keiji Mochida,Harumi Ishikubo,Takako Usami,Hidenori Aizawa,Hidenori Aizawa,Takashi Yamamoto,Kohichi Tanaka +13 more
TL;DR: This work identified exonuclease 1 (Exo1) as an enhancer for PITCh in human cells and mouse zygotes by combining the Exo1 and PITCh-directed donor vectors, which provide a technical platform for high-throughput knock-in.