Medical Image Computing and Computer-Assisted Intervention

Not-so-supervised: A survey of semi-supervised, multi-instance, and transfer learning in medical image analysis

We explore 3D human pose estimation from a single RGB image. While many approaches try to directly predict 3D pose from image measurements, we explore a simple architecture that reasons through intermediate 2D pose predictions. Our approach is based on two key observations (1) Deep neural nets have revolutionized 2D pose estimation, producing accurate 2D predictions even for poses with self-occlusions (2) Big-datasets of 3D mocap data are now readily available, making it tempting to lift predicted 2D poses to 3D through simple memorization (e.g., nearest neighbors). The resulting architecture is straightforward to implement with off-the-shelf 2D pose estimation systems and 3D mocap libraries. Importantly, we demonstratethatsuchmethodsoutperformalmostallstate-of-theart 3D pose estimation systems, most of which directly try to regress 3D pose from 2D measurements.

/pdf/3d-human-pose-estimation-2d-pose-estimation-matching-57bre1srhw.pdf

3D Human Pose Estimation = 2D Pose Estimation + Matching

Recognizing human activities from video sequences or still images is a challenging task due to problems such as background clutter, partial occlusion, changes in scale, viewpoint, lighting, and appearance. Many applications, including video surveillance systems, human-computer interaction, and robotics for human behavior characterization, require a multiple activity recognition system. In this work, we provide a detailed review of recent and state-of-the-art research advances in the field of human activity classification. We propose a categorization of human activity methodologies and discuss their advantages and limitations. In particular, we divide human activity classification methods into two large categories according to whether they use data from different modalities or not. Then, each of these categories is further analyzed into sub-categories, which reflect how they model human activities and what type of activities they are interested in. Moreover, we provide a comprehensive analysis of the existing, publicly available human activity classification datasets and examine the requirements for an ideal human activity recognition dataset. Finally, we report the characteristics of future research directions and present some open issues on human activity recognition.

/pdf/a-review-of-human-activity-recognition-methods-514sa539j7.pdf

A Review of Human Activity Recognition Methods

Blood vessel segmentation algorithms — Review of methods, datasets and evaluation metrics

Deep Vessel Segmentation By Learning Graphical Connectivity

We propose a framework for localization and classification of masses in breast ultrasound images. We have experimentally found that training convolutional neural network-based mass detectors with large, weakly annotated datasets presents a non-trivial problem, while overfitting may occur with those trained with small, strongly annotated datasets. To overcome these problems, we use a weakly annotated dataset together with a smaller strongly annotated dataset in a hybrid manner. We propose a systematic weakly and semi-supervised training scenario with appropriate training loss selection. Experimental results show that the proposed method can successfully localize and classify masses with less annotation effort. The results trained with only 10 strongly annotated images along with weakly annotated images were comparable to results trained from 800 strongly annotated images, with the 95% confidence interval (CI) of difference −3%–5%, in terms of the correct localization (CorLoc) measure, which is the ratio of images with intersection over union with ground truth higher than 0.5. With the same number of strongly annotated images, additional weakly annotated images can be incorporated to give a 4.5% point increase in CorLoc, from 80% to 84.50% (with 95% CIs 76%–83.75% and 81%–88%). The effects of different algorithmic details and varied amount of data are presented through ablative analysis.

Joint Weakly and Semi-Supervised Deep Learning for Localization and Classification of Masses in Breast Ultrasound Images

The availability of accurate depth cameras have made real-time human pose estimation possible; however, there are still demands for faster algorithms on low power processors. This paper introduces 1000 frames per second pose estimation method on a single core CPU. A large computation gain is achieved by random walk sub-sampling. Instead of training trees for pixel-wise classification, a regression tree is trained to estimate the probability distribution to the direction toward the particular joint, relative to the current position. At test time, the direction for the random walk is randomly chosen from a set of representative directions. The new position is found by a constant step toward the direction, and the distribution for next direction is found at the new position. The continual random walk through 3D space will eventually produce an expectation of step positions, which we estimate as the joint position. A regression tree is built separately for each joint. The number of random walk steps can be assigned for each joint so that the computation time is consistent regardless of the size of body segmentation. The experiments show that even with large computation gain, the accuracy is higher or comparable to the state-of-the-art pose estimation methods.

/pdf/random-tree-walk-toward-instantaneous-3d-human-pose-kecsesh15v.pdf

Random tree walk toward instantaneous 3D human pose estimation

We propose a framework for localization and classification of masses in breast ultrasound (BUS) images. We have experimentally found that training convolutional neural network based mass detectors with large, weakly annotated datasets presents a non-trivial problem, while overfitting may occur with those trained with small, strongly annotated datasets. To overcome these problems, we use a weakly annotated dataset together with a smaller strongly annotated dataset in a hybrid manner. We propose a systematic weakly and semi-supervised training scenario with appropriate training loss selection. Experimental results show that the proposed method can successfully localize and classify masses with less annotation effort. The results trained with only 10 strongly annotated images along with weakly annotated images were comparable to results trained from 800 strongly annotated images, with the 95% confidence interval of difference -3.00%--5.00%, in terms of the correct localization (CorLoc) measure, which is the ratio of images with intersection over union with ground truth higher than 0.5. With the same number of strongly annotated images, additional weakly annotated images can be incorporated to give a 4.5% point increase in CorLoc, from 80.00% to 84.50% (with 95% confidence intervals 76.00%--83.75% and 81.00%--88.00%). The effects of different algorithmic details and varied amount of data are presented through ablative analysis.

Soochahn Lee

Papers

Deep Vessel Segmentation By Learning Graphical Connectivity

Joint Weakly and Semi-Supervised Deep Learning for Localization and Classification of Masses in Breast Ultrasound Images

Random tree walk toward instantaneous 3D human pose estimation

Joint Weakly and Semi-Supervised Deep Learning for Localization and Classification of Masses in Breast Ultrasound Images

Scale-space approximated convolutional neural networks for retinal vessel segmentation.