S
Svenja Meyer
Publications - 5
Citations - 3868
Svenja Meyer is an academic researcher. The author has contributed to research in topics: Gene & Indel. The author has an hindex of 5, co-authored 5 publications receiving 3551 citations.
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Journal ArticleDOI
MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
Oliver Thimm,Oliver Bläsing,Yves Gibon,Axel Nagel,Svenja Meyer,Peter Krüger,Joachim Selbig,Lukas A. Müller,Seung Y. Rhee,Mark Stitt +9 more
TL;DR: Widespread changes in the expression of genes encoding receptor kinases, transcription factors, components of signalling pathways, proteins involved in post-translational modification and turnover, and proteins involved with the synthesis and sensing of cytokinins, abscisic acid and ethylene revealing large-scale rewiring of the regulatory network is an early response to sugar depletion are revealed.
Journal ArticleDOI
Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses
Björn Usadel,Axel Nagel,Oliver Thimm,Henning Redestig,Oliver E. Blaesing,Natalia Palacios-Rojas,Joachim Selbig,Jan Hannemann,Maria Piques,Dirk Steinhauser,Wolf-Rüdiger Scheible,Yves Gibon,Rosa Morcuende,Daniel Weicht,Svenja Meyer,Mark Stitt +15 more
TL;DR: New developments are presented, including improvements of the gene assignments and the user interface, a strategy to visualize multilayered datasets, and extensions of the software to incorporate more biological information including visualization of coresponding genes and horizontal searches for similar global responses across large numbers of arrays.
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Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf.
Ewa Urbanczyk-Wochniak,Björn Usadel,Oliver Thimm,Adriano Nunes-Nesi,Fernando Carrari,Marcus Davy,Oliver Bläsing,Magdalena Ewa Kowalczyk,Daniel Weicht,Anna Polinceusz,Svenja Meyer,Mark Stitt,Alisdair R. Fernie +12 more
TL;DR: Using three case studies with published or novel TOM1 array data sets for Solanaceous species, new expression array data for two genotypes deficient in TCA cycle enzymes is analysed to show that these genotypes have elevated levels of transcripts associated with photosynthesis.
Journal ArticleDOI
First-generation SNP/InDel markers tagging loci for pathogen resistance in the potato genome
Andreas M. Rickert,Jeong H. Kim,Svenja Meyer,Axel Nagel,Agim Ballvora,Peter J. Oefner,Christiane Gebhardt +6 more
TL;DR: A panel of 17 tetraploid and 11 diploid potato genotypes was screened by comparative sequence analysis of polymerase chain reaction (PCR) products for single nucleotide polymorphism (SNPs) and insertion-deletion polymorphisms (InDels), in regions of the potato genome where genes for qualitative and/or quantitative resistance to different pathogens have been localized.
Journal ArticleDOI
PoMaMo—a comprehensive database for potato genome data
TL;DR: The PoMaMo database is a comprehensive database for different potato genome data, and to date the only database containing SNP and InDel data from diploid and tetraploid potato genotypes.