U
Uday S. Evani
Researcher at Baylor College of Medicine
Publications - 25
Citations - 18105
Uday S. Evani is an academic researcher from Baylor College of Medicine. The author has contributed to research in topics: Genomics & 1000 Genomes Project. The author has an hindex of 16, co-authored 24 publications receiving 12274 citations. Previous affiliations of Uday S. Evani include Indiana University & Stanford University.
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Journal ArticleDOI
Tor1 regulates protein solubility in Saccharomyces cerevisiae
Theodore W. Peters,Matthew J. Rardin,Gregg Czerwieniec,Uday S. Evani,Pedro Reis-Rodrigues,Gordon J. Lithgow,Sean D. Mooney,Bradford W. Gibson,Robert E. Hughes +8 more
TL;DR: The transition of proteins targeted for autophagic degradation from the soluble to the insoluble phase is regulated in an ATG1-independent mechanism by TORC1, likely a critical mechanism for maintaining protein homeostasis when challenged with proteomic stress.
Journal ArticleDOI
STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation
Tobias Wittkop,Emily TerAvest,Uday S. Evani,K. Mathew Fleisch,Ari E. Berman,Corey Powell,Nigam H. Shah,Sean D. Mooney,Sean D. Mooney +8 more
TL;DR: The method Statistical Tracking of Ontological Phrases (STOP) is developed that expands the realm of testable hypotheses in gene set enrichment analyses by integrating automated annotations of genes to terms from over 200 biomedical ontologies.
Proceedings Article
An ontology-neutral framework for enrichment analysis
TL;DR: RANSUM - Rich Annotation Summarizer - which performs enrichment analysis using any ontology in the National Center for Biomedical Ontology's (NCBO) BioPortal is described.
Journal ArticleDOI
Integrative transcriptomic analysis of the amyotrophic lateral sclerosis spinal cord implicates glial activation and suggests new risk genes
Jack Humphrey,Sanan Venkatesh,Rahat Hasan,Jake T. Herb,Katia de Paiva Lopes,Fahri Küçükali,Marta Byrska-Bishop,Uday S. Evani,Giuseppe Narzisi,Delphine Fagegaltier,Kristel Sleegers,Hemali Phatnani,David A. Knowles,Pietro Fratta,Towfique Raj +14 more
Proceedings ArticleDOI
Massively Parallel Processing of Whole Genome Sequence Data: An In-Depth Performance Study
Abhishek Roy,Yanlei Diao,Uday S. Evani,Avinash Abhyankar,Clinton Howarth,Rémi Le Priol,Toby Bloom +6 more
TL;DR: A joint effort between a group of computer scientists and bioinformaticians to take an important step towards a general big data platform for genome analysis pipelines, based on the new "Wrapper Technology" that supports existing genomic data analysis programs in their native forms, without having to rewrite them.