There is, I think, something ethereal about i —the square root of minus one. I remember first hearing about it at school. It seemed an odd beast at that time—an intruder hovering on the edge of reality.

Usually familiarity dulls this sense of the bizarre, but in the case of i it was the reverse: over the years the sense of its surreal nature intensified. It seemed that it was impossible to write mathematics that described the real world in …

I and i

抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。

疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

Probability Distributions.- Linear Models for Regression.- Linear Models for Classification.- Neural Networks.- Kernel Methods.- Sparse Kernel Machines.- Graphical Models.- Mixture Models and EM.- Approximate Inference.- Sampling Methods.- Continuous Latent Variables.- Sequential Data.- Combining Models.

Pattern Recognition and Machine Learning

N G van Kampen 1981 Amsterdam: North-Holland xiv + 419 pp price Dfl 180 This is a book which, at a lower price, could be expected to become an essential part of the library of every physical scientist concerned with problems involving fluctuations and stochastic processes, as well as those who just enjoy a beautifully written book. It provides an extensive graduate-level introduction which is clear, cautious, interesting and readable.

https://iopscience.iop.org/article/10.1088/0031-9112/34/4/040/pdf

Stochastic Processes in Physics and Chemistry

Weyl and Dirac semimetals are three-dimensional phases of matter with gapless electronic excitations that are protected by topology and symmetry. As three-dimensional analogs of graphene, they have generated much recent interest. Deep connections exist with particle physics models of relativistic chiral fermions, and, despite their gaplessness, to solid-state topological and Chern insulators. Their characteristic electronic properties lead to protected surface states and novel responses to applied electric and magnetic fields. The theoretical foundations of these phases, their proposed realizations in solid-state systems, and recent experiments on candidate materials as well as their relation to other states of matter are reviewed.

Weyl and Dirac semimetals in three-dimensional solids

Shear fields due to weak gravitational lensing have characteristic coherent patterns. We describe the topological defects in shear fields in terms of the curvature of the surface described by the lensing potential. A simple interpretation of the characteristic defects is given in terms of the the umbilical points of the potential surface produced by ellipsoidal halos. We show simulated lensing shear maps and point out the typical defect configurations. Finally, we show how statistical properties such as the abundance of defects can be expressed in terms of the correlation function of the lensing potential.

https://iopscience.iop.org/article/10.1088/1475-7516/2009/09/034/pdf

Topological Defects in Gravitational Lensing Shear Fields

We present a theoretical study of director fields in toroidal geometries with degenerate planar boundary conditions. We find spontaneous chirality: despite the achiral nature of nematics the director configuration show a handedness if the toroid is thick enough. In the chiral state the director field displays a double twist, whereas in the achiral state there is only bend deformation. The critical thickness increases as the difference between the twist and saddle-splay moduli grows. A positive saddle-splay modulus prefers alignment along the short circle of the bounding torus, and hence stimulates promotes a chiral configuration. The chiral-achiral transition mimics the order-disorder transition of the mean-field Ising model. The role of the magnetisation in the Ising model is played by the degree of twist. The role of the temperature is played by the aspect ratio of the torus. Remarkably, an external field does not break the chiral symmetry explicitly, but shifts the transition. In the case of toroidal cholesterics, we do find a preference for one chirality over the other -- the molecular chirality acts as a field in the Ising analogy.

Saddle-splay screening and chiral symmetry breaking in toroidal nematics

Topological states can be used to control the mechanical properties of a material along an edge or around a localized defect. The rigidity of elastic networks is characterized by a topological invariant called the polarization; materials with a well-defined uniform polarization display a dramatic range of edge softness depending on the orientation of the polarization relative to the terminating surface. However, in all 3D mechanical metamaterials proposed to date, the topological modes are mixed with bulk soft modes, which organize themselves in Weyl loops. Here, we report the design of a 3D topological metamaterial without Weyl lines and with a uniform polarization that leads to an asymmetry between the number of soft modes on opposing surfaces. We then use this construction to localize topological soft modes in interior regions of the material by including defect lines—dislocation loops—that are unique to three dimensions. We derive a general formula that relates the difference in the number of soft modes and states of self-stress localized along the dislocation loop to the handedness of the vector triad formed by the lattice polarization, Burgers vector, and dislocation-line direction. Our findings suggest a strategy for preprogramming failure and softness localized along lines in 3D, while avoiding extended soft Weyl modes.

/pdf/localizing-softness-and-stress-along-loops-in-3d-topological-27bdm2up5m.pdf

Localizing softness and stress along loops in 3D topological metamaterials

The elastic response of many natural and man-made solid structures, ranging from atomic lattices to bridges, can be understood by viewing them as a network of balls (nodes) connected by springs (compressible struts). The rigidity of the resulting solids depends crucially on the average coordination number of the elastic network, z (i.e., the average number of nodes each node is connected to). This number specifies the average topology of the network. It is a global feature that cannot be changed by smoothly deforming the positions of the nodes; instead, you need to cut the struts.

https://www.pnas.org/content/pnas/109/31/12266.full.pdf

Topological soft matter: Kagome lattices with a twist.

The mechanical response of active media ranging from biological gels to living tissues is governed by a subtle interplay between viscosity and elasticity. We generalize the canonical Kelvin-Voigt and Maxwell models to active viscoelastic media that break both parity and time-reversal symmetries. The resulting continuum theories exhibit viscous and elastic tensors that are both antisymmetric, or odd, under exchange of pairs of indices. We analyze how these parity violating viscoelastic coefficients determine the relaxation mechanisms and wave-propagation properties of odd materials.

/pdf/active-viscoelasticity-of-odd-materials-273xany1p5.pdf

Vincenzo Vitelli

Papers

Topological Defects in Gravitational Lensing Shear Fields

Saddle-splay screening and chiral symmetry breaking in toroidal nematics

Localizing softness and stress along loops in 3D topological metamaterials

Topological soft matter: Kagome lattices with a twist.

Active Viscoelasticity of Odd Materials