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William J. Bug
Researcher at Drexel University
Publications - 7
Citations - 2904
William J. Bug is an academic researcher from Drexel University. The author has contributed to research in topics: Open Biomedical Ontologies & Neuroinformatics. The author has an hindex of 5, co-authored 7 publications receiving 2697 citations.
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Journal ArticleDOI
The OBO Foundry : coordinated evolution of ontologies to support biomedical data integration
Barry Smith,Michael Ashburner,Cornelius Rosse,Jonathan Bard,William J. Bug,Werner Ceusters,Louis J. Goldberg,Karen Eilbeck,Amelia Ireland,Christopher J. Mungall,Neocles B. Leontis,Philippe Rocca-Serra,Alan Ruttenberg,Susanna-Assunta Sansone,Richard H. Scheuermann,Nigam H. Shah,Patricia L. Whetzel,Suzanna E. Lewis +17 more
TL;DR: This work describes the OBO Foundry initiative and provides guidelines for those who might wish to become involved and describes an expanding family of ontologies designed to be interoperable and logically well formed and to incorporate accurate representations of biological reality.
Journal ArticleDOI
Advancing translational research with the Semantic Web
Alan Ruttenberg,Timothy Clark,William J. Bug,Matthias Samwald,Olivier Bodenreider,Helen H. Chen,Donald Doherty,Kerstin Forsberg,Yong Gao,Vipul Kashyap,June Kinoshita,Joanne S. Luciano,M. Scott Marshall,Chimezie Ogbuji,Jonathan Rees,Susie Stephens,Gwendolyn T. Wong,Elizabeth Wu,Davide Zaccagnini,Tonya Hongsermeier,Eric K. Neumann,Ivan Herman,Kei-Hoi Cheung +22 more
TL;DR: A scenario that shows the value of the information environment the Semantic Web can support for aiding neuroscience researchers is presented and several projects by members of the HCLSIG are reported, illustrating the range ofSemantic Web technologies that have applications in areas of biomedicine.
Proceedings Article
The OWL of Biomedical Investigations.
Mélanie Courtot,William J. Bug,Frank Gibson,Allyson L. Lister,James Malone,Daniel Schober,Ryan R. Brinkman,Alan Ruttenberg +7 more
TL;DR: The experiences and development process as it pertains to OWL, which includes a number of elements that might inform tool developers as well as suggest general development patterns, are described.
Journal ArticleDOI
NeuroTerrain – a client-server system for browsing 3D biomedical image data sets
TL;DR: The combination of an optimized server and modular, platform-independent client provides an ideal environment for viewing complex 3D biomedical datasets, taking full advantage of high-performance servers to prepare images and subsets of associated meta-data for viewing, as well as the graphical capabilities in Java to actually display the data.
Journal ArticleDOI
A guide to building image-centric databases
William J. Bug,Jonathan Nissanov +1 more
TL;DR: This practicum describes neuroinformatics approaches at different levels of functionality, required expertise, and size of image datasets and provides guidance in selecting among the different options.