Y
Yoshimi Shimizu
Publications - 6
Citations - 1065
Yoshimi Shimizu is an academic researcher. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 3, co-authored 3 publications receiving 995 citations.
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Journal ArticleDOI
Genome Structure of the Legume, Lotus japonicus
Shusei Sato,Yasukazu Nakamura,Takakazu Kaneko,Erika Asamizu,Tomohiko Kato,Mitsuteru Nakao,Shigemi Sasamoto,Akiko Watanabe,Akiko Ono,Kumiko Kawashima,Tsunakazu Fujishiro,Midori Katoh,Mitsuyo Kohara,Yoshie Kishida,Chiharu Minami,Shinobu Nakayama,Naomi Nakazaki,Yoshimi Shimizu,Sayaka Shinpo,Chika Takahashi,Tsuyuko Wada,Manabu Yamada,Nobuko Ohmido,Makoto Hayashi,Kiichi Fukui,Tomoya Baba,Tomoko Nakamichi,Hirotada Mori,Satoshi Tabata +28 more
TL;DR: Structural features of the L. japonicus genome are reported, providing the first opportunity to look into the complex and unique genetic system of legumes.
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Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843.
Takakazu Kaneko,Nobuyoshi Nakajima,Shinobu Okamoto,Iwane Suzuki,Yuuhiko Tanabe,Masanori Tamaoki,Yasukazu Nakamura,Fumie Kasai,Akiko Watanabe,Kumiko Kawashima,Yoshie Kishida,Akiko Ono,Yoshimi Shimizu,Chika Takahashi,Chiharu Minami,Tsunakazu Fujishiro,Mitsuyo Kohara,Midori Katoh,Naomi Nakazaki,Shinobu Nakayama,Manabu Yamada,Satoshi Tabata,Makoto Watanabe +22 more
TL;DR: In addition to known gene clusters related to the synthesis of microcystin and cyanopeptolin, novel gene clusters that may be involved in the synthesis and modification of toxic small polypeptides were identified.
Journal ArticleDOI
Complete Genomic Structure of the Cultivated Rice Endophyte Azospirillum sp. B510
Takakazu Kaneko,Kiwamu Minamisawa,Tsuyoshi Isawa,Hiroki Nakatsukasa,Hisayuki Mitsui,Yasuyuki Kawaharada,Yasukazu Nakamura,Akiko Watanabe,Kumiko Kawashima,Akiko Ono,Yoshimi Shimizu,Chika Takahashi,Chiharu Minami,Tsunakazu Fujishiro,Mitsuyo Kohara,Midori Katoh,Naomi Nakazaki,Shinobu Nakayama,Manabu Yamada,Satoshi Tabata,Shusei Sato +20 more
TL;DR: Multiple gene-clusters for tripartite ATP-independent periplasmic-transport systems and a diverse set of malic enzymes were identified, suggesting that B510 utilizes C4-dicarboxylate during its symbiotic relationship with the host plant.
Journal ArticleDOI
The function of SARS-CoV-2 spike protein is impaired by disulfide-bond disruption with mutation at cysteine-488 and by thiol-reactive N-acetyl-cysteine and glutathione
Mana Murae,Yoshimi Shimizu,Yuichiro Yamamoto,Asuka Kobayashi,Masumi Houri,T. Inoue,Takuya Irie,Ryutaro Gemba,Yosuke Kondo,Yoshio Nakano,N. Miyazaki,Daisuke Yamada,Akiyoshi Saitoh,Isao Ishii,Taishi Onodera,Yoshimasa Takahashi,Takaji Wakita,Masayoshi Fukasawa,Kohji Noguchi +18 more
TL;DR: In this paper , the substitution of Cys-488 with alanine impaired pseudotyped SARS-CoV-2 infection, syncytium formation, and cell-cell fusion triggered by spike expression.
Journal ArticleDOI
Direct Inhibition of SARS-CoV-2 Spike Protein by Peracetic Acid
Yuichiro Yamamoto,Yoshio Nakano,Mana Murae,Yoshimi Shimizu,Shota Sakai,Motohiko Ogawa,Tomoharu Mizukami,T. Inoue,Taishi Onodera,Yoshimasa Takahashi,Takaji Wakita,Masayoshi Fukasawa,Satoru Miyazaki,Kohji Noguchi +13 more
TL;DR: Zhang et al. as mentioned in this paper showed that peracetic acid (PAA) disinfectants are effective against a wide range of pathogenic microorganisms, including bacteria, fungi, and viruses.