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Molecular Characterisation and Antibiogram of Vaginal Flora from Students Attending a Tertiary Institution in Port Harcourt, Rivers State, Nigeria

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TLDR
The study has revealed that the vaginal microbiome of healthy female subjects is characterised by diverse species of bacteria, including opportunistic bacterial pathogens, which means regular screening for bacterial vaginosis as well as personal hygiene, sensitization programs to improve knowledge of women should be encouraged.
Abstract
The microbiome of the vagina is characterized by a community bacteria playing important roles in the overall health status of the female genital tract. This study was conducted to isolate and characterize bacteria from the female genital tract and as well evaluate the antibiotics susceptibility pattern of the vaginal bacterial isolates. For this purpose, a total of fifty (50) vaginal swab samples were collected (using sterile swab sticks) from females attending a tertiary institution in Port Harcourt, Rivers State, Nigeria, and subjected to standard bacteriological analysis. Antibiotics sensitivity analysis was carried out using the modified Kirby Bauer disc diffusion method. A total of 160 bacterial isolates were obtained from the subjects of different age brackets in the study population. Molecular identification based on the nucleic acid sequence of the bacterial isolates revealed the isolates to be Escherichia coli, Staphylococcus aureus, Klebsiella pneumoniae, Bacillus flexus and Lysinibacillus macrolides. The result further showed that Escherichia coli was the most occurring bacterial isolate. Also, female subjects within the age bracket 21-23 years recorded the highest number of bacterial isolates (67) and 24-26 years had the least number of bacterial isolates (36). The antibiotic sensitivity analysis revealed that Escherichia coli and Staphylococcus aureus were resistant to 50% of the antibiotics tested, whereas Klebsiella Original Research Article Sampson et al.; IJPR, 7(1): 17-27, 2021; Article no.IJPR.69130 18 pneumoniae was resistant to all (100% of) the antibiotics tested. The study has revealed that the vaginal microbiome of healthy female subjects is characterised by diverse species of bacteria, including opportunistic bacterial pathogens. The study therefore, recommended that regular screening for bacterial vaginosis as well as personal hygiene, sensitization programs to improve knowledge of women, should be encouraged.

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Evolution of Protein Molecules

Use of 16S rRNA gene for identification of a broad range of clinically relevant bacterial pathogens - eScholarship

TL;DR: This study assembled an extensive repository of clinical isolates, representing 30 medically important pathogenic species and originally identified using traditional culture-based or non-16S molecular methods, and built a Naïve Bayes classifier representing a diverse set of high-quality sequences from medically important bacterial organisms.
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References
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The neighbor-joining method: a new method for reconstructing phylogenetic trees.

TL;DR: The neighbor-joining method and Sattath and Tversky's method are shown to be generally better than the other methods for reconstructing phylogenetic trees from evolutionary distance data.
Journal ArticleDOI

Phylogenies and the Comparative Method

TL;DR: A method of correcting for the phylogeny has been proposed, which specifies a set of contrasts among species, contrasts that are statistically independent and can be used in regression or correlation studies.
Journal ArticleDOI

Evolution of Protein Molecules

Journal ArticleDOI

Vaginal microbiome of reproductive-age women

TL;DR: The inherent differences within and between women in different ethnic groups strongly argues for a more refined definition of the kinds of bacterial communities normally found in healthy women and the need to appreciate differences between individuals so they can be taken into account in risk assessment and disease diagnosis.
Book

Performance Standards for Antimicrobial Susceptibility Testing: Twentieth Informational Supplement

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TL;DR: The tabular information presented here represents the most current information for drug selection, interpretation, and quality control using the procedures standardized in M02 and M07, and users should replace the tables published earlier with these new tables.