Apakah fungsi dari Basic Local Alignment Search Tool?
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The Basic Local Alignment Search Tool (BLAST) is a suite of algorithms used for identifying matches between biological sequences. BLAST creates local sequence alignments by building a database of small sub-sequences called k-mers, which are used as seeds for longer alignments. It is known for its speed and is commonly used in genomic research. BLAST can be parallelized on high-performance computing clusters, and optimal data partitioning can significantly improve its runtime. BLASTN, a nucleotide BLAST application, has been profiled using different methods to develop performance models for guiding data parallelization. BLAST software has been rewritten and improved, with features such as breaking long query sequences into chunks and retrieving only relevant parts of database sequences. Visualization tools like BLAST Output Visualization Tool (BOV) have also been developed to aid in interpreting complex BLAST pair-wise alignments.
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| Papers (4) | Insight |
|---|---|
| The paper does not explicitly mention the function of the Basic Local Alignment Search Tool (BLAST). | |
| The function of the Basic Local Alignment Search Tool (BLAST) is to perform sequence similarity searches by comparing a query sequence against a sequence database to find matches. | |
| BLANT is the analog of BLAST, but for networks. It samples small, induced, k-node sub-graphs called k-graphlets from an input graph. | |
| The function of the Basic Local Alignment Search Tool (BLAST) is to identify matches between biological sequences by comparing a database file and a query file of sequences. |
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