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Åsa Pérez-Bercoff
Researcher at University of New South Wales
Publications - 15
Citations - 579
Åsa Pérez-Bercoff is an academic researcher from University of New South Wales. The author has contributed to research in topics: Gene duplication & Metabolic network. The author has an hindex of 10, co-authored 15 publications receiving 521 citations. Previous affiliations of Åsa Pérez-Bercoff include Karolinska Institutet & Trinity College, Dublin.
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Journal ArticleDOI
HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics
Rui M. M. Branca,Lukas M. Orre,Henrik J. Johansson,Viktor Granholm,Mikael Huss,Åsa Pérez-Bercoff,Jenny Forshed,Lukas Käll,Janne Lehtiö +8 more
TL;DR: A liquid chromatography–mass spectrometry (LC-MS)-based method permitting unbiased (gene prediction–independent) genome-wide discovery of protein-coding loci in higher eukaryotes is presented.
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Cryptococcus gattii in North American Pacific Northwest: Whole-Population Genome Analysis Provides Insights into Species Evolution and Dispersal
David M. Engelthaler,Nathan D. Hicks,John D. Gillece,Chandler C. Roe,James M. Schupp,Elizabeth M. Driebe,Felix Gilgado,Fabian Carriconde,Fabian Carriconde,Luciana Trilles,Luciana Trilles,Carolina Firacative,Popchai Ngamskulrungroj,Popchai Ngamskulrungroj,Elizabeth Castañeda,Márcia dos Santos Lazéra,Marcia S. C. Melhem,Åsa Pérez-Bercoff,Åsa Pérez-Bercoff,Gavin A. Huttley,Tania C. Sorrell,Kerstin Voelz,Kerstin Voelz,Robin C. May,Robin C. May,Matthew C. Fisher,George Richard Thompson,Shawn R. Lockhart,Paul Keim,Paul Keim,Wieland Meyer +30 more
TL;DR: The emergence of distinct populations of Cryptococcus gattii in the temperate North American Pacific Northwest was surprising, as this species was previously thought to be confined to tropical and semitropical regions.
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LogoBar: bar graph visualization of protein logos with gaps
TL;DR: LogoBar as discussed by the authors is a Java application to display protein sequence logos, where gaps are accounted for when calculating the information content present at each residue position in a multiple alignment, and residues can either be arranged according to their relative abundance or grouped according to user criteria to emphasize the conserved nature of particular positions.
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Overview and comparison of ortholog databases.
TL;DR: A large number of resources now exist, each with its own idiosyncrasies, and the goal of this review is to compare their contents and clarify which database is most suited for a certain task.
Journal ArticleDOI
Low frequency of mtDNA point mutations in patients with PEO associated with POLG1 mutations.
Gittan Kollberg,Monica Jansson,Åsa Pérez-Bercoff,Atle Melberg,Christopher Lindberg,Elisabeth Holme,Ali-Reza Moslemi,Anders Oldfors +7 more
TL;DR: It is concluded that mtDNA point mutations do not appear to be directly or indirectly involved in the pathogenesis of mitochondrial disease in patients with different POLG1 mutations.