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Bryan D. Clifton
Researcher at University of California, Irvine
Publications - 11
Citations - 68
Bryan D. Clifton is an academic researcher from University of California, Irvine. The author has contributed to research in topics: Population & Gene. The author has an hindex of 4, co-authored 8 publications receiving 41 citations.
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Journal ArticleDOI
Rapid Functional And Sequence Differentiation of a Tandemly-Repeated Species-Specific Multigene Family in Drosophila
Bryan D. Clifton,Pablo Librado,Shu Dan Yeh,Edwin Solares,Daphne A. Real,Suvini Jayasekera,Wanting Zhang,Mijuan Shi,Ronni V. Park,Robert D. Magie,Hsiu Ching Ma,Xiao-Qin Xia,Antonio Marco,Julio Rozas,José M. Ranz +14 more
TL;DR: The results strongly suggest that the genome consolidation of the Sdic gene cluster is more the result of a quick exploration of different paths of molecular tinkering by different copies than a mere dosage increase, which could be a recurrent evolutionary outcome in the presence of persistent sexual selection.
Journal ArticleDOI
Characterization and evolutionary dynamics of complex regions in eukaryotic genomes.
José M. Ranz,Bryan D. Clifton +1 more
TL;DR: Recon reconstructions of complex regions will finally allow for accurate functional and evolutionary studies of complex genomic regions, underlying the generation of genotype-phenotype maps of unprecedented resolution.
Journal ArticleDOI
Understanding the Early Evolutionary Stages of a Tandem Drosophilamelanogaster-Specific Gene Family: A Structural and Functional Population Study.
Bryan D. Clifton,Jamie Jimenez,Ashlyn Kimura,Zeinab Chahine,Pablo Librado,Alejandro Sánchez-Gracia,Mashya Abbassi,Francisco Carranza,Carolus Chan,Marcella Marchetti,Wanting Zhang,Mijuan Shi,Christine T. Vu,Shu Dan Yeh,Shu Dan Yeh,Laura Fanti,Xiao-Qin Xia,Julio Rozas,José M. Ranz +18 more
TL;DR: Beyond facilitating a minimally optimal expression level, Sdic CNV acts as a catalyst of protein and regulatory diversity, showcasing a possible evolutionary path recently formed tandem multigene families can follow toward long-term consolidation in eukaryotic genomes.
Journal ArticleDOI
A de novo transcriptional atlas in Danaus plexippus reveals variability in dosage compensation across tissues.
José M. Ranz,Pablo M. González,Bryan D. Clifton,Nestor O. Nazario-Yepiz,Pablo Luis Hernández-Cervantes,María J. Palma-Martínez,Dulce I. Valdivia,Andrés Jiménez-Kaufman,Megan M. Lu,Therese A. Markow,Therese A. Markow,Cei Abreu-Goodger,Cei Abreu-Goodger +12 more
TL;DR: A genome assembly is generated from a Mexican nonmigratory population and RNA-seq data from 14 biological samples are used for gene annotation and to construct an atlas portraying the breadth of gene expression during most of the monarch life cycle, which will facilitate a better understanding of D. plexippus ’ adaptation to a changing environment.
Journal ArticleDOI
A species-specific multigene family mediates differential sperm displacement in Drosophila melanogaster.
Vivek Jayaswal,Jamie Jimenez,Robert D. Magie,Kien Nguyen,Bryan D. Clifton,Shu Dan Yeh,José M. Ranz +6 more
TL;DR: It is found that a less effective removal of first‐to‐mate male's sperm within the female's sperm storage organs is consistent with a reduced sperm competitive ability of the Sdic knockout males, highlighting the role young genes can play in driving the evolution of sperm competition.