C
Carol A. Fulcher
Researcher at SRI International
Publications - 14
Citations - 6661
Carol A. Fulcher is an academic researcher from SRI International. The author has contributed to research in topics: EcoCyc & Metabolic network. The author has an hindex of 12, co-authored 14 publications receiving 5738 citations. Previous affiliations of Carol A. Fulcher include University of California, San Francisco & National Autonomous University of Mexico.
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Journal ArticleDOI
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
Ron Caspi,Richard Billington,Luciana Ferrer,Hartmut Foerster,Carol A. Fulcher,Ingrid M. Keseler,Anamika Kothari,Markus Krummenacker,Mario Latendresse,Lukas A. Mueller,Quang Ong,Suzanne M. Paley,Pallavi Subhraveti,Daniel Weaver,Peter D. Karp +14 more
TL;DR: The BioCyc PGDBs generated by SRI are offered for adoption by any interested party for the ongoing integration of metabolic and genome-related information about an organism.
Journal ArticleDOI
The MetaCyc database of metabolic pathways and enzymes.
Ron Caspi,Richard Billington,Carol A. Fulcher,Ingrid M. Keseler,Anamika Kothari,Markus Krummenacker,Mario Latendresse,Peter E. Midford,Quang Ong,Wai Kit Ong,Suzanne M. Paley,Pallavi Subhraveti,Peter D. Karp +12 more
TL;DR: This article provides an update on the developments in MetaCyc during the past two years, including the expansion of data and addition of new features.
Journal ArticleDOI
MetaCyc: a multiorganism database of metabolic pathways and enzymes
Ron Caspi,Hartmut Foerster,Carol A. Fulcher,Rebecca Hopkinson,John L. Ingraham,Pallavi Kaipa,Markus Krummenacker,Suzanne M. Paley,John Pick,Seung Y. Rhee,Christophe Tissier,Peifen Zhang,Peter D. Karp +12 more
TL;DR: In the past 2 years the data content and the Pathway Tools software used to query, visualize and edit MetaCyc have been expanded significantly, and these enhancements are described in this paper.
Journal ArticleDOI
EcoCyc: fusing model organism databases with systems biology
Ingrid M. Keseler,Amanda Mackie,Martín Peralta-Gil,Alberto Santos-Zavaleta,Socorro Gama-Castro,César Bonavides-Martínez,Carol A. Fulcher,Araceli M. Huerta,Anamika Kothari,Markus Krummenacker,Mario Latendresse,Luis Muñiz-Rascado,Quang Ong,Suzanne M. Paley,Imke Schröder,Alexander G. Shearer,Pallavi Subhraveti,Michael Travers,Deepika Weerasinghe,Verena Weiss,Julio Collado-Vides,Robert P. Gunsalus,Ian T. Paulsen,Peter D. Karp +23 more
TL;DR: EcoCyc is a model organism database built on the genome sequence of Escherichia coli K-12 MG1655, and the development of EcoCyc as a teaching tool is increasing the impact of the knowledge collected in Eco cycl.
Journal ArticleDOI
The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.
Ingrid M. Keseler,Amanda Mackie,Alberto Santos-Zavaleta,Richard Billington,César Bonavides-Martínez,Ron Caspi,Carol A. Fulcher,Socorro Gama-Castro,Anamika Kothari,Markus Krummenacker,Mario Latendresse,Luis Muñiz-Rascado,Quang Ong,Suzanne M. Paley,Martín Peralta-Gil,Pallavi Subhraveti,David A. Velázquez-Ramírez,Daniel Weaver,Julio Collado-Vides,Ian T. Paulsen,Peter D. Karp +20 more
TL;DR: EcoCyc now supports running and modifying E. coli metabolic models directly on the EcoCyc website, and new SmartTable tools allow users to browse collections of related Eco Cyc content.