C
Catherine André
Researcher at University of Rennes
Publications - 140
Citations - 5516
Catherine André is an academic researcher from University of Rennes. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 37, co-authored 136 publications receiving 4978 citations. Previous affiliations of Catherine André include French Institute of Health and Medical Research & Centre national de la recherche scientifique.
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Journal ArticleDOI
Identification of Genomic Regions Associated with Phenotypic Variation between Dog Breeds using Selection Mapping
Amaury Vaysse,Abhirami Ratnakumar,Thomas Derrien,Erik Axelsson,Gerli Pielberg,Snaevar Sigurdsson,Tove Fall,Eija H. Seppälä,Mark Hansen,Cindy Lawley,Elinor K. Karlsson,Danika L. Bannasch,Carles Vilà,Hannes Lohi,Francis Galibert,Merete Fredholm,Jens Häggström,Åke Hedhammar,Catherine André,Kerstin Lindblad-Toh,Christophe Hitte,Matthew T. Webster +21 more
TL;DR: This study provides a catalogue of genomic regions showing extreme reduction in genetic variation or population differentiation in dogs, including many linked to phenotypic variation.
Journal ArticleDOI
Coat Variation in the Domestic Dog Is Governed by Variants in Three Genes
Edouard Cadieu,Mark W. Neff,Pascale Quignon,Kari F. Walsh,Kevin Chase,Heidi G. Parker,Bridgett M. vonHoldt,Alison Rhue,Adam B. Boyko,Alexandra M. Byers,Aaron K. Wong,Dana S. Mosher,Abdel G. Elkahloun,Tyrone C. Spady,Catherine André,Gordon K. Lark,Michelle Cargill,Carlos Bustamante,Robert K. Wayne,Elaine A. Ostrander +19 more
TL;DR: Genome-wide association studies of more than 1000 dogs from 80 domestic breeds identified distinct mutations in three genes, RSPO2, FGF5, and KRT71 (encoding R-spondin–2, fibroblast growth factor– 5, and keratin-71, respectively), that together account for most coat phenotypes in purebred dogs in the United States.
Journal ArticleDOI
Chromosome-Specific Single-Locus FISH Probes Allow Anchorage of an 1800-Marker Integrated Radiation-Hybrid/Linkage Map of the Domestic Dog Genome to All Chromosomes
Matthew Breen,S Jouquand,Corinne Renier,Cathryn S. Mellersh,Christophe Hitte,N. G. Holmes,Angélique Chéron,Nicola M. Suter,Françoise Vignaux,Anna E. Bristow,Catherine Priat,E. McCann,Catherine André,Sam Boundy,Paul Gitsham,Rachael Thomas,Wendy L. Bridge,Helen F. Spriggs,Edward Ryder,Alistair Curson,J. Sampson,Elaine A. Ostrander,Matthew M. Binns,Francis Galibert +23 more
TL;DR: The inclusion of 320 dog genes into this integrated map enhances existing comparative mapping data between human and dog, and the 1000 mapped microsatellite markers constitute an invaluable tool with which to perform genome scanning studies on pedigrees of interest.
Journal ArticleDOI
FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome.
Valentin Wucher,Fabrice Legeai,Benoit Hedan,Guillaume Rizk,Laetitia Lagoutte,Tosso Leeb,Vidhya Jagannathan,Edouard Cadieu,Audrey David,Hannes Lohi,Susanna Cirera,Merete Fredholm,Nadine Botherel,Peter A. J. Leegwater,Céline Le Béguec,Hille Fieten,Jeremy Johnson,Jessica Alföldi,Catherine André,Kerstin Lindblad-Toh,Christophe Hitte,Thomas Derrien +21 more
TL;DR: FEELnc is presented, an alignment-free program that accurately annotates lncRNAs based on a Random Forest model trained with general features such as multi k-mer frequencies and relaxed open reading frames and achieves similar or better classification performance on GENCODE and NONCODE data sets.
Journal ArticleDOI
A 1-Mb resolution radiation hybrid map of the canine genome.
Richard Guyon,Travis D. Lorentzen,Christophe Hitte,Lisa Kim,Edouard Cadieu,Heidi G. Parker,Pascale Quignon,Jennifer K. Lowe,Corinne Renier,Boris Gelfenbeyn,Françoise Vignaux,Hawkins B. DeFrance,Stéphanie Gloux,Gregory G. Mahairas,Catherine André,Francis Galibert,Elaine A. Ostrander +16 more
TL;DR: This work presents a comprehensive radiation hybrid map of the canine genome composed of 3,270 markers including 1,596 microsatellite-based markers, 900 cloned gene sequences and ESTs, 668 canine-specific bacterial artificial chromosome ends, and 106 sequence-tagged sites.