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Chai Yin Kok
Researcher at Wellcome Trust Sanger Institute
Publications - 15
Citations - 12373
Chai Yin Kok is an academic researcher from Wellcome Trust Sanger Institute. The author has contributed to research in topics: COSMIC cancer database & Cancer. The author has an hindex of 9, co-authored 15 publications receiving 9631 citations.
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Journal ArticleDOI
COSMIC: the Catalogue Of Somatic Mutations In Cancer
John Tate,Sally Bamford,Harry Jubb,Harry Jubb,Zbyslaw Sondka,David Beare,Nidhi Bindal,Harry Boutselakis,Charlotte G. Cole,Celestino Creatore,Elisabeth Dawson,Peter Fish,Bhavana Harsha,Charlie Hathaway,Steve C Jupe,Chai Yin Kok,Kate Noble,Laura Ponting,Christopher C Ramshaw,Claire Rye,Helen E. Speedy,Raymund Stefancsik,Sam Thompson,Shicai Wang,Sari Ward,Peter J. Campbell,Simon A. Forbes +26 more
TL;DR: Improvements to the public website and data-download systems and new functionality in COSMIC-3D allows exploration of mutations within three-dimensional protein structures, their protein structural and functional impacts, and implications for druggability.
Journal ArticleDOI
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer.
Simon A. Forbes,Nidhi Bindal,Sally Bamford,Charlotte G. Cole,Chai Yin Kok,David Beare,Mingming Jia,Rebecca Shepherd,Kenric Leung,Andrew Menzies,Jon W. Teague,Peter J. Campbell,Michael R. Stratton,P. Andrew Futreal +13 more
TL;DR: With all genomic information recently updated to GRCh37, COSMIC integrates many diverse types of mutation information and is making much closer links with Ensembl and other data resources.
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COSMIC: exploring the world's knowledge of somatic mutations in human cancer
Simon A. Forbes,David Beare,Prasad Gunasekaran,Kenric Leung,Nidhi Bindal,Harry Boutselakis,Minjie Ding,Sally Bamford,Charlotte G. Cole,Sari Ward,Chai Yin Kok,Mingming Jia,Tisham De,Jon W. Teague,Michael R. Stratton,Ultan McDermott,Peter J. Campbell +16 more
TL;DR: COSMIC, the Catalogue Of Somatic Mutations In Cancer is the world's largest and most comprehensive resource for exploring the impact of somatic mutations in human cancer, describing 2 002 811 coding point mutations in over one million tumor samples and across most human genes.
Journal ArticleDOI
COSMIC: somatic cancer genetics at high-resolution.
Simon A. Forbes,David Beare,Harry Boutselakis,Sally Bamford,Nidhi Bindal,John Tate,Charlotte G. Cole,Sari Ward,Elisabeth Dawson,Laura Ponting,Raymund Stefancsik,Bhavana Harsha,Chai Yin Kok,Mingming Jia,Harry Jubb,Zbyslaw Sondka,Sam Thompson,Tisham De,Peter J. Campbell +18 more
TL;DR: COSMIC v78 contains wide resistance mutation profiles across 20 drugs, detailing the recurrence of 301 unique resistance alleles across 1934 drug-resistant tumours.
Journal ArticleDOI
Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes
Gillian L. Dalgliesh,Kyle A. Furge,Christopher Greenman,Lina Chen,Graham R. Bignell,Adam Butler,Helen Davies,Sarah Edkins,Claire Hardy,Calli Latimer,Jon W. Teague,Jenny Andrews,Syd Barthorpe,Dave Beare,Gemma Buck,Peter J. Campbell,Simon A. Forbes,Mingming Jia,David T. Jones,Henry Knott,Chai Yin Kok,King Wai Lau,Catherine Leroy,Meng-Lay Lin,David J. McBride,Mark Maddison,Simon Maguire,Kirsten McLay,Andrew Menzies,Tatiana Mironenko,Lee Mulderrig,Laura Mudie,Sarah O’Meara,Erin Pleasance,Aarjunan Rajasingham,Rebecca Shepherd,Raffaella Smith,Lucy Stebbings,Philip J. Stephens,Gurpreet Tang,Patrick S. Tarpey,Kelly Turrell,Karl Dykema,Sok Kean Khoo,David Petillo,Bill Wondergem,John Anema,Richard J. Kahnoski,Bin Tean Teh,Bin Tean Teh,Michael R. Stratton,Michael R. Stratton,P. Andrew Futreal +52 more
TL;DR: The identification of inactivating mutations in two genes encoding enzymes involved in histone modification and NF2 mutations were found in non-VHL mutated ccRCC, and several other probable cancer genes were identified, indicating that substantial genetic heterogeneity exists in a cancer type dominated by mutations in a single gene.