D
Daniel Muller
Researcher at Claude Bernard University Lyon 1
Publications - 69
Citations - 4637
Daniel Muller is an academic researcher from Claude Bernard University Lyon 1. The author has contributed to research in topics: Rhizosphere & Gene. The author has an hindex of 29, co-authored 62 publications receiving 3760 citations. Previous affiliations of Daniel Muller include University of Lyon & Centre national de la recherche scientifique.
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Journal ArticleDOI
Plant growth-promoting rhizobacteria and root system functioning.
Jordan Vacheron,Guilhem Desbrosses,Marie-Lara Bouffaud,Bruno Touraine,Yvan Moënne-Loccoz,Daniel Muller,Laurent Legendre,Florence Wisniewski-Dyé,Claire Prigent-Combaret +8 more
TL;DR: Novel knowledge and gaps on PGPR modes of action and signals are addressed, recent progress on the links between plant morphological and physiological effects induced by PGPR are highlighted, and the importance of taking into account the size, diversity, and gene expression patterns of PGPR assemblages in the rhizosphere to better understand their impact on plant growth and functioning is shown.
Journal ArticleDOI
Let the Core Microbiota Be Functional.
TL;DR: It is argued that this so-called functional core microbiota encompasses microbial vehicles carrying replicators with essential functions for holobiont fitness, which builds up from enhanced horizontal transfers of replicators as well as from ecological enrichment of their vehicles.
Journal ArticleDOI
Arsenite oxidase aox genes from a metal-resistant β-proteobacterium
Daniel Muller,Didier Lièvremont,Diliana D. Simeonova,Diliana D. Simeonova,Jean-Claude Hubert,Marie-Claire Lett +5 more
TL;DR: R Reverse transcription-PCR data indicated that these genes are organized in an operonic structure, and an additional Tat (twin-arginine translocation) signal peptide sequence was detected at the N terminus of the protein encoded by aoxA, strongly suggesting that the Tat pathway is involved in the translocation of the arsenite oxidase to its known periplasmic location.
Journal ArticleDOI
A tale of two oxidation states: bacterial colonization of arsenic-rich environments.
Daniel Muller,Claudine Médigue,Sandrine Koechler,Valérie Barbe,Mohamed Barakat,Emmanuel Talla,Violaine Bonnefoy,Evelyne Krin,Florence Arsène-Ploetze,Christine Carapito,Michael Chandler,Benoit Cournoyer,Stéphane Cruveiller,Caroline Dossat,Simon Duval,Michaël Heymann,Emmanuelle Leize,Aurélie Lieutaud,Didier Lièvremont,Yuko Makita,Sophie Mangenot,Wolfgang Nitschke,Philippe Ortet,Nicolas Perdrial,Barbara Schoepp,Patricia Siguier,Diliana D. Simeonova,Zoé Rouy,Béatrice Segurens,Evelyne Turlin,David Vallenet,Alain Van Dorsselaer,Stéphanie Weiss,Jean Weissenbach,Marie-Claire Lett,Antoine Danchin,Philippe N. Bertin +36 more
TL;DR: In-depth exploration of the genome of the β-proteobacterium Herminiimonas arsenicoxydans with regard to physiology, genetics, and proteomics revealed that it possesses heretofore unsuspected mechanisms for coping with arsenic.
Journal ArticleDOI
Root microbiome relates to plant host evolution in maize and other Poaceae.
Marie-Lara Bouffaud,Marie-Lara Bouffaud,Marie-Andrée Poirier,Marie-Andrée Poirier,Daniel Muller,Daniel Muller,Yvan Moënne-Loccoz,Yvan Moënne-Loccoz +7 more
TL;DR: It is shown that the genetic distance between rhizobacterial communities correlated significantly with the phylogenetic distance (derived from chloroplastic sequences) between Poaceae genotypes, indicating that eukaryotic host's evolutionary history can be a significant factor shaping directly the assembly and composition of its associated bacterial compartment.