scispace - formally typeset
D

David E. Shaw

Researcher at D. E. Shaw Research

Publications -  326
Citations -  50142

David E. Shaw is an academic researcher from D. E. Shaw Research. The author has contributed to research in topics: Massively parallel & G protein-coupled receptor. The author has an hindex of 88, co-authored 298 publications receiving 42616 citations. Previous affiliations of David E. Shaw include Protein Sciences & Genentech.

Papers
More filters
Journal ArticleDOI

Minimizing thermodynamic length to select intermediate states for free-energy calculations and replica-exchange simulations.

TL;DR: This work derives bounds for quantities in terms of the thermodynamic distance between the intermediates in two cases where the choice of intermediate states is particularly important: minimizing statistical error in free-energy difference calculations and maximizing average acceptance probabilities in replica-exchange simulations.
Journal ArticleDOI

Insights into the conformational flexibility of Bruton's tyrosine kinase from multiple ligand complex structures.

TL;DR: The first crystal structure of a Tec kinase family member in the pharmacologically important DFG‐out conformation and bound to a type II kinase inhibitor is described, providing insights into the structural flexibility of BTK, the molecular basis of its regulation, and the structure‐based design of specific inhibitors.
Journal ArticleDOI

Structural insights for design of potent spleen tyrosine kinase inhibitors from crystallographic analysis of three inhibitor complexes.

TL;DR: The novel protein–ligand interactions and protein conformational changes revealed in these structures guide the rational design and structure‐based optimization of second‐generation spleen tyrosine kinase inhibitors.
Journal ArticleDOI

Identification of biomarkers for the antiangiogenic and antitumour activity of the superoxide dismutase 1 (SOD1) inhibitor tetrathiomolybdate (ATN-224)

TL;DR: Preclinical evaluation of two potential biomarkers for the activity of tetrathiomolybdate: SOD activity measurements in blood cells in mice and levels of endothelial progenitor cells (EPCs) in bonnet macaques treated with ATN-224.