D
Dean Cheng
Researcher at University of Alberta
Publications - 5
Citations - 7363
Dean Cheng is an academic researcher from University of Alberta. The author has contributed to research in topics: Human Metabolome Database & Metabolome. The author has an hindex of 5, co-authored 5 publications receiving 6466 citations. Previous affiliations of Dean Cheng include National Institute for Nanotechnology.
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Journal ArticleDOI
HMDB: The human metabolome database
David S. Wishart,Dan Tzur,Craig Knox,Roman Eisner,An Chi Guo,Nelson Young,Dean Cheng,Kevin Jewell,David Arndt,Summit Sawhney,Chris Fung,Lisa Nikolai,Michael J. Lewis,Marie-Aude Coutouly,Ian D. Forsythe,Peter Tang,Savita Shrivastava,Kevin Jeroncic,Paul Stothard,Godwin Amegbey,David Block,David Hau,James Wagner,Jessica Miniaci,Melisa Clements,Mulu Gebremedhin,Natalie Guo,Ying Wen Zhang,Gavin E. Duggan,Glen D. MacInnis,Alim M. Weljie,Reza Dowlatabadi,Fiona Bamforth,Derrick L. J. Clive,Russell Greiner,Liang Li,Thomas J. Marrie,Brian D. Sykes,Hans J. Vogel,Lori M.M. Querengesser +39 more
TL;DR: The Human Metabolome Database is designed to address the broad needs of biochemists, clinical chemists, physicians, medical geneticists, nutritionists and members of the metabolomics community.
Journal ArticleDOI
DrugBank: a knowledgebase for drugs, drug actions and drug targets
David S. Wishart,Craig Knox,An Chi Guo,Dean Cheng,Savita Shrivastava,Dan Tzur,Bijaya Gautam,Murtaza Hassanali +7 more
TL;DR: The latest version of DrugBank (release 2.0) has been expanded significantly over the previous release and contains 60% more FDA-approved small molecule and biotech drugs including 10% more ‘experimental’ drugs.
Journal ArticleDOI
HMDB: a knowledgebase for the human metabolome
David S. Wishart,Craig Knox,An Chi Guo,Roman Eisner,Nelson Young,Bijaya Gautam,David Hau,Nick Psychogios,Edison Dong,Souhaila Bouatra,Rupasri Mandal,Igor Sinelnikov,Jianguo Xia,Leslie Jia,Joseph A. Cruz,Emilia L. Lim,Constance A. Sobsey,Savita Shrivastava,Paul Huang,Philip Liu,Lydia Fang,Jun Peng,Ryan Fradette,Dean Cheng,Dan Tzur,Melisa Clements,Avalyn Lewis,Andrea De Souza,Azaret Zuniga,Margot Dawe,Yeping Xiong,Derrick L. J. Clive,Russell Greiner,Alsu Nazyrova,Rustem Shaykhutdinov,Liang Li,Hans J. Vogel,Ian J. Forsythe +37 more
TL;DR: The most recent release of HMDB has been significantly expanded and enhanced over the previous release, with the number of fully annotated metabolite entries growing from 2180 to more than 6800, a 300% increase.
Journal ArticleDOI
The human cerebrospinal fluid metabolome.
David S. Wishart,David S. Wishart,Michael J. Lewis,Joshua A. Morrissey,M.D. Flegel,Kevin Jeroncic,Yeping Xiong,Dean Cheng,Roman Eisner,Bijaya Gautam,Dan Tzur,Summit Sawhney,Fiona Bamforth,Russell Greiner,Liang Li +14 more
TL;DR: This work has chosen to characterize CSF as the first biofluid to be intensively scrutinized and identified and quantify essentially all of the metabolites that can be commonly detected in the human CSF metabolome.
Journal ArticleDOI
PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites
TL;DR: The PolySearch web server, a web-based tool that supports comprehensive queries in genomics, proteomics or metabolomics, and exploits a variety of techniques in text mining and information retrieval to identify, highlight and rank informative abstracts, paragraphs or sentences.