抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。

疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

So far in this course we have dealt entirely with the evolution of characters that are controlled by simple Mendelian inheritance at a single locus. There are notes on the course website about gametic disequilibrium and how allele frequencies change at two loci simultaneously, but we didn’t discuss them. In every example we’ve considered we’ve imagined that we could understand something about evolution by examining the evolution of a single gene. That’s the domain of classical population genetics. For the next few weeks we’re going to be exploring a field that’s actually older than classical population genetics, although the approach we’ll be taking to it involves the use of population genetic machinery. If you know a little about the history of evolutionary biology, you may know that after the rediscovery of Mendel’s work in 1900 there was a heated debate between the “biometricians” (e.g., Galton and Pearson) and the “Mendelians” (e.g., de Vries, Correns, Bateson, and Morgan). Biometricians asserted that the really important variation in evolution didn’t follow Mendelian rules. Height, weight, skin color, and similar traits seemed to

Human biochemical genetics

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Modern Applied Statistics With S

1. Introduction and Overview. 2. Detecting Influential Observations and Outliers. 3. Detecting and Assessing Collinearity. 4. Applications and Remedies. 5. Research Issues and Directions for Extensions. Bibliography. Author Index. Subject Index.

Regression Diagnostics: Identifying Influential Data and Sources of Collinearity

Wingless female Zeus bugs (genus: Phoreticovelia) produce a secretion from dorsal glands that males feed upon when riding on females. This unique form of sex-role-reversed nuptial feeding may have set the stage for an unusual mating system. Here, we provide natural history details of the mating behaviour for two Zeus bug species. While these species have many mating behaviours in common, the wing morphs within species exhibit entirely different mating strategies. Adult wingless females are ridden permanently by adult wingless males. In the wild, adult sex-ratios among the wingless morph are male-biased; few unmounted adult females exist and many males instead ride immature females who also produce glandular secretions. In contrast, sex-ratios among the winged morph is not male-biased, sexual size dimorphism is less pronounced, females have no dorsal glands and are, consequently, not ridden by males. Field and laboratory observations show that mating is strongly assortative by wing morph. This assortment may allow evolutionary divergence between the two morphs. We discuss the implications of this mating system and suggest that it adds to those studies showing that sexually antagonistic coevolution can be a driver of mating system evolution.

/pdf/the-extraordinary-mating-system-of-zeus-bugs-heteroptera-33epq28dmy.pdf

The extraordinary mating system of Zeus bugs (Heteroptera : Veliidae : Phoreticovelia sp.)

Understanding the forces that maintain diversity across a range of scales is at the very heart of biology. Frequency-dependent processes are generally recognized as the most central process for the maintenance of ecological diversity. The same is, however, not generally true for genetic diversity. Negative frequency dependent selection, where rare genotypes have an advantage, is often regarded as a relatively weak force in maintaining genetic variation in life history traits because recombination disassociates alleles across many genes. Yet, many regions of the genome show low rates of recombination and genetic variation in such regions (i.e., supergenes) may in theory be upheld by frequency dependent selection. We studied what is essentially a ubiquitous life history supergene (i.e., mitochondrial DNA) in the fruit fly Drosophila subobscura, showing sympatric polymorphism with two main mtDNA genotypes co-occurring in populations world-wide. Using an experimental evolution approach involving manipulations of genotype starting frequencies, we show that negative frequency dependent selection indeed acts to maintain genetic variation in this region. Moreover, the strength of selection was affected by food resource conditions. Our work provides novel experimental support for the view that balancing selection through negative frequency dependency acts to maintain genetic variation in life history genes. We suggest that the emergence of negative frequency dependent selection on mtDNA is symptomatic of the fundamental link between ecological processes related to resource use and the maintenance of genetic variation.

/pdf/negative-frequency-dependent-selection-contributes-to-the-35w6m7oi55.pdf

Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA.

Mitochondrial DNA (mtDNA) consists of few but vital maternally inherited genes that interact closely with nuclear genes to produce cellular energy. How important mtDNA polymorphism is for adaptation is still unclear. The assumption in population genetic studies is often that segregating mtDNA variation is selectively neutral. This contrasts with empirical observations of mtDNA haplotypes affecting fitness-related traits and thermal sensitivity, and latitudinal clines in mtDNA haplotype frequencies. Here, we experimentally test whether ambient temperature affects selection on mtDNA variation, and whether such thermal effects are influenced by intergenomic epistasis due to interactions between mitochondrial and nuclear genes, using replicated experimental evolution in Callosobruchus maculatus seed beetle populations seeded with a mixture of different mtDNA haplotypes. We also test for sex-specific consequences of mtDNA evolution on reproductive success, given that mtDNA mutations can have sexually antagonistic fitness effects. Our results demonstrate natural selection on mtDNA haplotypes, with some support for thermal environment influencing mtDNA evolution through mitonuclear epistasis. The changes in male and female reproductive fitness were both aligned with changes in mtDNA haplotype frequencies, suggesting that natural selection on mtDNA is sexually concordant in stressful thermal environments. We discuss the implications of our findings for the evolution of mtDNA.

https://onlinelibrary.wiley.com/doi/pdf/10.1002/ece3.6775

An experimental test of temperature‐dependent selection on mitochondrial haplotypes in Callosobruchus maculatus seed beetles

Brown Pelican Foraging Success Related to Age and Height of Dive

Sexual selection can promote adaptation if sexually selected traits are reliable indicators of genetic quality. Moreover, stronger sexual selection in males, as often reported in empirical studies, may help purge deleterious alleles at a low cost to population productivity. However, to what extent this remains true when a changing environment affects sexual selection dynamics has been debated. Here, we show that even if sexually selected traits remain honest signals of male quality in new environments, the efficacy of sexual selection will often be reduced under stress. We model the strength of sex-specific selection under different levels of environmental stress in a population in which males compete with each other for fertilization success and in which females experience fecundity selection. We observe that the strength of sexual selection is reduced relative to fecundity selection, resulting in a lowered potential for selection on males to aid adaptation under environmental change.

https://www.biorxiv.org/content/biorxiv/early/2018/03/16/283457.full.pdf

Göran Arnqvist

Papers

The extraordinary mating system of Zeus bugs (Heteroptera : Veliidae : Phoreticovelia sp.)

Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA.

An experimental test of temperature‐dependent selection on mitochondrial haplotypes in Callosobruchus maculatus seed beetles

Brown Pelican Foraging Success Related to Age and Height of Dive

The efficacy of sexual selection under environmental change