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Showing papers by "Huaming Chen published in 2009"

Journal Article•DOI•
Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays

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Samuel P. Hazen1, Samuel P. Hazen2, Felix Naef3, Tom Quisel3, Joshua M. Gendron2, Huaming Chen4, Joseph R. Ecker4, Justin O. Borevitz5, Steve A. Kay2 •
University of Massachusetts Amherst1, University of California, San Diego2, École Polytechnique Fédérale de Lausanne3, Salk Institute for Biological Studies4, University of Chicago5
11 Feb 2009-Genome Biology
TL;DR: This study revealed widespread circadian clock regulation of the Arabidopsis genome extending well beyond the protein coding transcripts measured to date, which suggests a greater level of structural and temporal dynamics than previously known.
Abstract: Background Organisms are able to anticipate changes in the daily environment with an internal oscillator know as the circadian clock. Transcription is an important mechanism in maintaining these oscillations. Here we explore, using whole genome tiling arrays, the extent of rhythmic expression patterns genome-wide, with an unbiased analysis of coding and noncoding regions of the Arabidopsis genome.

114 citations