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Huifang Lin
Researcher at Centers for Disease Control and Prevention
Publications - 12
Citations - 1105
Huifang Lin is an academic researcher from Centers for Disease Control and Prevention. The author has contributed to research in topics: Population & Outbreak. The author has an hindex of 9, co-authored 12 publications receiving 640 citations. Previous affiliations of Huifang Lin include Peking Union Medical College.
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Journal ArticleDOI
Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China.
Jing Lu,Louis du Plessis,Zhe Liu,Verity Hill,Min Kang,Huifang Lin,Jiufeng Sun,Sarah François,Moritz U. G. Kraemer,Nuno R. Faria,John T. McCrone,Jingju Peng,Qianlin Xiong,Runyu Yuan,Lilian Zeng,Pingping Zhou,Chumin Liang,Lina Yi,Jun Liu,Jianpeng Xiao,Jianxiong Hu,Tao Liu,Wenjun Ma,Wei Li,Juan Su,Huanying Zheng,Bo Peng,Shisong Fang,Wenzhe Su,Kuibiao Li,Ruilin Sun,Ru Bai,Xi Tang,Minfeng Liang,Josh Quick,Tie Song,Andrew Rambaut,Nicholas J. Loman,Jayna Raghwani,Oliver G. Pybus,Changwen Ke +40 more
TL;DR: Combined epidemiological and phylogenetic analyses indicate multiple independent introductions to Guangdong, although phylogenetic clustering is uncertain because of low virus genetic variation early in the pandemic.
Posted ContentDOI
Viral infection and transmission in a large, well-traced outbreak caused by the SARS-CoV-2 Delta variant
Jing Lu,Jing Lu,Baisheng Li,Baisheng Li,Aiping Deng,Aiping Deng,Kuibiao Li,Yao Hu,Yao Hu,Zhencui Li,Zhencui Li,Qianlin Xiong,Qianlin Xiong,Zhe Liu,Zhe Liu,Qianfang Guo,Qianfang Guo,Lirong Zou,Lirong Zou,Huan Zhang,Huan Zhang,Meng Zhang,Meng Zhang,Fangzhu Ouyang,Fangzhu Ouyang,Juan Su,Juan Su,Wenzhe Su,Jing Xu,Jing Xu,Huifang Lin,Huifang Lin,Jing Sun,Jing Sun,Jinju Peng,Jinju Peng,Huimin Jiang,Huimin Jiang,Pingping Zhou,Pingping Zhou,Huanying Zheng,Huanying Zheng,Jianpeng Xiao,Jianpeng Xiao,Tao Liu,Tao Liu,Rongfei Che,Rongfei Che,Hanri Zeng,Hanri Zeng,Zhonghua Zheng,Zhonghua Zheng,Yushi Huang,Yushi Huang,Jianxiang Yu,Jianxiang Yu,Lina Yi,Lina Yi,Jie Wu,Jie Wu,Jing-diao Chen,Jing-diao Chen,Haojie Zhong,Haojie Zhong,Xiaoling Deng,Xiaoling Deng,Min Kang,Min Kang,Oliver G. Pybus,Matthew Hall,Katrina A. Lythgoe,Yan Li,Yan Li,Jun Yuan,Jianfeng He,Jianfeng He +75 more
TL;DR: Daily sequential PCR testing of the quarantined subjects indicated that the viral loads of Delta infections, when they first become PCR+, were on average ~1000 times greater compared to A/B lineage infections during initial epidemic wave in China in 2020, suggesting potentially faster viral replication and greater infectiousness of Delta during early infection.
Posted ContentDOI
Viral infection and Transmission in a large well-traced outbreak caused by the Delta SARS-CoV-2 variant
Baisheng Li,Baisheng Li,Aiping Deng,Aiping Deng,Kuibiao Li,Yao Hu,Yao Hu,Zhencui Li,Zhencui Li,Qianling Xiong,Qianling Xiong,Zhe Liu,Zhe Liu,Qianfang Guo,Qianfang Guo,Lirong Zou,Lirong Zou,Huan Zhang,Huan Zhang,Meng Zhang,Meng Zhang,Fangzhu Ouyang,Fangzhu Ouyang,Juan Su,Juan Su,Wenzhe Su,Jing Xu,Jing Xu,Huifang Lin,Huifang Lin,Jing Sun,Jing Sun,Jinju Peng,Jinju Peng,Huimin Jiang,Huimin Jiang,Pingping Zhou,Pingping Zhou,Ting Hu,Ting Hu,Min Luo,Min Luo,Yingtao Zhang,Yingtao Zhang,Huanying Zheng,Huanying Zheng,Jianpeng Xiao,Jianpeng Xiao,Tao Liu,Tao Liu,Rongfei Che,Rongfei Che,Hanri Zeng,Hanri Zeng,Zhonghua Zheng,Zhonghua Zheng,Yushi Huang,Yushi Huang,Jianxiang Yu,Jianxiang Yu,Lina Yi,Lina Yi,Jie Wu,Jie Wu,Jing-diao Chen,Jing-diao Chen,Haojie Zhong,Haojie Zhong,Xiaoling Deng,Xiaoling Deng,Min Kang,Min Kang,Oliver G. Pybus,Matthew Hall,Katrina A. Lythgoe,Yan Li,Yan Li,Jun Yuan,Jianfeng He,Jianfeng He,Jing Lu,Jing Lu +81 more
TL;DR: Wang et al. as discussed by the authors reported the first local transmission of the Delta SARS-CoV-2 variant in mainland China and all 167 infections could be traced back to the first index case.
Journal ArticleDOI
Clinical, immunological and virological characterization of COVID-19 patients that test re-positive for SARS-CoV-2 by RT-PCR.
Jing Lu,Jing Lu,Jinju Peng,Jinju Peng,Qianling Xiong,Qianling Xiong,Zhe Liu,Huifang Lin,Xiaohua Tan,Min Kang,Runyu Yuan,Lilian Zeng,Pingping Zhou,Chumin Liang,Lina Yi,Louis du Plessis,Tie Song,Wenjun Ma,Jiufeng Sun,Oliver G. Pybus,Changwen Ke +20 more
TL;DR: Re-positive SARS-CoV-2 cases do not appear to be caused by active reinfection and were identified in ~14% of discharged cases, suggesting a substantially lower transmission risk, especially through respiratory routes.
Journal ArticleDOI
Identification of Common Deletions in the Spike Protein of Severe Acute Respiratory Syndrome Coronavirus 2.
Zhe Liu,Huanying Zheng,Huifang Lin,Mingyue Li,Runyu Yuan,Jinju Peng,Qianling Xiong,Jiufeng Sun,Baisheng Li,Jie Wu,Lina Yi,Xiaofang Peng,Huan Zhang,Wei Zhang,Ruben J.G. Hulswit,Nicholas J. Loman,Andrew Rambaut,Changwen Ke,Thomas A. Bowden,Oliver G. Pybus,Oliver G. Pybus,Jing Lu +21 more
TL;DR: There may be distinct selection pressures on SARS-CoV-2 replication or infection in vitro and in vivo; an efficient mechanism for deleting this region from the viral genome may exist, given that the deletion variant is commonly detected after two rounds of cell passage.