S
Sarah François
Researcher at University of Oxford
Publications - 22
Citations - 1075
Sarah François is an academic researcher from University of Oxford. The author has contributed to research in topics: Viral metagenomics & Densovirus. The author has an hindex of 8, co-authored 20 publications receiving 477 citations. Previous affiliations of Sarah François include Institut national de la recherche agronomique & University of Montpellier.
Papers
More filters
Journal ArticleDOI
Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study.
Katherine A Twohig,Tommy Nyberg,Asad Zaidi,Simon Thelwall,Mary Sinnathamby,Shirin Aliabadi,Shaun R. Seaman,Ross J Harris,Russell Hope,Jamie Lopez-Bernal,Eileen Gallagher,Andre Charlett,Daniela De Angelis,Daniela De Angelis,Anne M. Presanis,Anne M. Presanis,Gavin Dabrera,Cherian Koshy,Amy Ash,Emma L. Wise,Nathan Moore,Matilde Mori,Nick Cortes,Jessica Lynch,Stephen P. Kidd,Derek Fairley,Tanya Curran,James McKenna,Helen Adams,Christophe Fraser,Tanya Golubchik,David Bonsall,Mohammed O Hassan-Ibrahim,Cassandra S Malone,Benjamin J Cogger,Michelle Wantoch,Nicola Reynolds,Ben Warne,Joshua Maksimovic,Karla Spellman,Kathryn McCluggage,Michaela John,Robert Beer,Safiah Afifi,Sian Morgan,Angela Marchbank,Anna Price,Christine Kitchen,Huw Gulliver,Ian Merrick,Joel Southgate,Martyn Guest,Robert J. Munn,Trudy Workman,Thomas R. Connor,William D. Fuller,Catherine Bresner,Luke B Snell,Amita Patel,Themoula Charalampous,Gaia Nebbia,Rahul Batra,Jonathan D. Edgeworth,Samuel Robson,Angela Helen Beckett,David M. Aanensen,Anthony Underwood,Corin Yeats,Khalil Abudahab,Ben Taylor,Mirko Menegazzo,Gemma Clark,Wendy Smith,Manjinder Khakh,Vicki M. Fleming,Michelle Lister,Hannah C. Howson-Wells,Louise Berry,Tim Boswell,Amelia Joseph,Iona Willingham,Carl Jones,Christopher W Holmes,Paul W Bird,Thomas Helmer,Karlie Fallon,Julian Tang,Veena Raviprakash,Sharon Campbell,Nicola Sheriff,Victoria Blakey,Lesley-Anne Williams,Matthew Loose,Nadine Holmes,Christopher I. Moore,Matthew Carlile,Victoria Wright,Fei Sang,Johnny Debebe,Francesc Coll,Adrian W Signell,Gilberto Betancor,Harry D Wilson,Sahar Eldirdiri,Anita Kenyon,Thomas R. A. Davis,Oliver G. Pybus,Louis du Plessis,Alex Zarebski,Jayna Raghwani,Moritz U. G. Kraemer,Sarah François,Stephen W Attwood,Tetyana I. Vasylyeva,Marina Escalera Zamudio,Bernardo Gutierrez,M. Estée Török,William L Hamilton,Ian Goodfellow,Grant Hall,Aminu S Jahun,Yasmin Chaudhry,Myra Hosmillo,Malte L Pinckert,Iliana Georgana,S.E. Moses,Hannah Lowe,Luke Bedford,Jonathan D. Moore,Susanne Stonehouse,Chloe L Fisher,Ali R Awan,John Boyes,Judith Breuer,Kathryn Ann Harris,Julianne R Brown,Divya K. Shah,Laura Atkinson,Jack Cd Lee,Nathaniel Storey,Flavia Flaviani,Adela Alcolea-Medina,Rebecca Williams,Gabrielle Vernet,Michael A Chapman,Lisa J Levett,Judith Heaney,Wendy Chatterton,Monika Pusok,Li Xu-McCrae,Darren Smith,Matthew Bashton,Gregory R Young,Alison Holmes,Paul Randell,Alison Cox,Pinglawathee Madona,Frances Bolt,James I. Price,Siddharth Mookerjee,Manon Ragonnet-Cronin,Fabrícia F. Nascimento,David Jorgensen,Igor Siveroni,Robert Johnson,Olivia Boyd,Lily Geidelberg,Erik M. Volz,Aileen G. Rowan,Graham P. Taylor,Katherine Smollett,Nicholas J. Loman,Joshua Quick,Claire McMurray,Joanne D. Stockton,Samuel M. Nicholls,Will P. M. Rowe,Radoslaw Poplawski,Alan McNally,Rocio Martinez Nunez,Jenifer Mason,Trevor Robinson,Elaine O'Toole,Joanne Watts,Cassie Breen,Angela Cowell,Graciela Sluga,Nicholas W Machin,Shazaad Ahmad,Ryan P George,Fenella D. Halstead,Venkat Sivaprakasam,Wendy Hogsden,Christopher J. R. Illingworth,Christopher Jackson,E. Thomson,James Shepherd,Patawee Asamaphan,Marc Niebel,Kathy Li,Rajiv Shah,Natasha Jesudason,Lily Tong,Alice Broos,Daniel Mair,Jenna Nichols,Stephen Carmichael,Kyriaki Nomikou,Elihu Aranday-Cortes,Natasha Johnson,Igor Starinskij,Ana da Silva Filipe,David Robertson,Richard J. Orton,Joseph Hughes,Sreenu Vattipally,Joshua B Singer,Seema Nickbakhsh,Antony D Hale,Louissa R Macfarlane-Smith,Katherine L Harper,Holli Carden,Yusri Taha,Brendan A I Payne,Shirelle Burton-Fanning,Sheila Waugh,Jennifer Collins,Gary Eltringham,Steven Rushton,Sarah J. O'Brien,Amanda Bradley,Alasdair MacLean,Guy Mollett,Rachel Blacow,Kate Templeton,Martin P McHugh,Rebecca Dewar,Elizabeth Wastenge,Samir Dervisevic,Rachael Stanley,Emma Meader,Lindsay Coupland,Louise Smith,Clive Graham,Edward Barton,Debra Padgett,Garren Scott,Emma Swindells,Jane Greenaway,Andrew J. Nelson,Clare M. McCann,Wen Yew,Monique Andersson,Tim E. A. Peto,Anita Justice,David W Eyre,Derrick W. Crook,Tim J Sloan,Nichola Duckworth,Sarah Walsh,Anoop Chauhan,Sharon Glaysher,Kelly Bicknell,Sarah Wyllie,Scott Elliott,A Lloyd,Robert Impey,Nick Levene,Lynn Monaghan,Declan Bradley,Tim Wyatt,Elias Allara,Clare Pearson,Husam Osman,Andrew Bosworth,Esther Robinson,Peter Muir,Ian B Vipond,Richard Hopes,Hannah M Pymont,Stephanie Hutchings,Martin D. Curran,Surendra Parmar,Angie Lackenby,Tamyo Mbisa,Steven Platt,Shahjahan Miah,David F. Bibby,Carmen F. Manso,Jonathan Hubb,Meera Chand,Mary Ramsay,Daniel Bradshaw,Alicia Thornton,Richard H. Myers,Ulf Schaefer,Natalie Groves,David C. Lee,David J. Williams,Nicholas Ellaby,Ian Harrison,Hassan Hartman,Nikos Manesis,Vineet Patel,Chloe Bishop,Vicki Chalker,Juan Ledesma,Katherine Twohig,Matthew T. G. Holden,Sharif Shaaban,Alec Birchley,Alexander Adams,Alisha Davies,Amy Gaskin,Amy Plimmer,Bree Gatica-Wilcox,Caoimhe McKerr,Catherine Moore,Christopher Williams,David Heyburn,Elen De Lacy,Ember Hilvers,Fatima Downing,Giri Shankar,Hannah Jones,Hibo Asad,Jason Coombes,Joanne Watkins,Johnathan M Evans,Laia Fina,Laura Gifford,Lauren Gilbert,Lee Graham,Malorie Perry,M Morgan,Matthew J. Bull,Michelle Cronin,Nicole Pacchiarini,Noel Craine,Rachel Jones,Robin Howe,Sally Corden,Sara Rey,Sara Kumziene-Summerhayes,S Taylor,Simon Cottrell,Sophie Jones,Sue Edwards,Justin O'Grady,Andrew J. Page,Alison E. Mather,David Baker,Steven Rudder,Alp Aydin,Gemma L. Kay,Alexander J. Trotter,Nabil-Fareed Alikhan,Leonardo de Oliveira Martins,Thanh Le-Viet,Lizzie Meadows,Anna L. Casey,Liz Ratcliffe,David Simpson,Zoltan Molnar,Thomas Thompson,Erwan Acheson,Jane A. H. Masoli,Bridget Knight,Sian Ellard,Cressida Auckland,Christopher I. Jones,Tabitha Mahungu,Dianne Irish-Tavares,Tanzina Haque,Jennifer Hart,Eric Witele,Melisa Louise Fenton,Ashok Dadrah,Amanda Symmonds,Tranprit Saluja,Yann Bourgeois,Garry Scarlett,Katie F. Loveson,Salman Goudarzi,Christopher Fearn,Kate B. Cook,Hannah Dent,Hannah Paul,David G Partridge,Mohammad Raza,Cariad Evans,Kate Johnson,Steven Liggett,Paul Baker,Stephen Bonner,Sarah Essex,Ronan Lyons,Kordo Saeed,Adhyana I K Mahanama,Buddhini Samaraweera,Siona Silveira,Emanuela Pelosi,Eleri Wilson-Davies,Rachel Williams,Mark Kristiansen,Sunando Roy,Charlotte A Williams,Marius Cotic,Nadua Bayzid,Adam P Westhorpe,John C. Hartley,Riaz Jannoo,Helen L Lowe,Angeliki Karamani,Leah Ensell,Jacqui Prieto,Sarah Jeremiah,Dimitris Grammatopoulos,Sarojini Pandey,Lisa Berry,Katie Jones,Alex G. Richter,Andrew D Beggs,Angus I. Best,Benita Percival,Jeremy Mirza,Oliver Megram,Megan Mayhew,Liam Crawford,Fiona Ashcroft,Emma Moles-Garcia,Nicola Cumley,Colin Smith,Giselda Bucca,Andrew Hesketh,Beth Blane,Sophia T Girgis,Danielle Leek,Sushmita Sridhar,Sally Forrest,Claire Cormie,Harmeet K Gill,Joana Dias,Ellen Higginson,Mailis Maes,Jamie Young,Leanne M Kermack,Ravi Gupta,Catherine Ludden,Sharon J. Peacock,Sophie Palmer,Carol Churcher,Nazreen F. Hadjirin,Alessandro M Carabelli,Ellena Brooks,Kim S Smith,Katerina Galai,Georgina M McManus,Christopher Ruis,Rose K Davidson,Andrew Rambaut,Thomas N. Williams,Carlos Balcazar,Michael Gallagher,Áine O'Toole,Stefan Rooke,Verity Hill,Kathleen A. Williamson,Thomas D Stanton,Stephen L. Michell,Claire M Bewshea,Ben Temperton,Michelle L Michelsen,Joanna Warwick-Dugdale,Robin Manley,Audrey Farbos,James W. Harrison,Christine Sambles,David J. Studholme,Aaron R. Jeffries,Leigh M Jackson,Alistair C. Darby,Julian A. Hiscox,Steve Paterson,Miren Iturriza-Gomara,Kathryn A Jackson,Anita Lucaci,Edith Vamos,Margaret Hughes,Lucille Rainbow,Richard Eccles,Charlotte Nelson,Mark Whitehead,Lance Turtle,Sam Haldenby,Richard Gregory,Matthew Gemmell,Claudia Wierzbicki,Hermione J. Webster,Thushan I de Silva,Nikki Smith,Adrienn Angyal,Benjamin B Lindsey,Danielle C. Groves,Luke R. Green,Dennis Wang,Timothy M. Freeman,Matthew Parker,Alexander J Keeley,Paul J. Parsons,Rachel Tucker,Rebecca C H Brown,Matthew Wyles,Max Whiteley,Peijun Zhang,Marta Gallis,Stavroula F Louka,Chrystala Constantinidou,Meera Unnikrishnan,Sascha Ott,Jeffrey K. J. Cheng,Hannah E Bridgewater,Lucy R. Frost,Grace Taylor-Joyce,Richard Stark,Laura Baxter,Mohammad Tauqeer Alam,Paul E Brown,Dinesh Aggarwal,Alberto C Cerda,Tammy V Merrill,Rebekah E Wilson,Patrick McClure,Joseph G. Chappell,Theocharis Tsoleridis,Jonathan K. Ball,David Buck,John A. Todd,Angie Green,Amy Trebes,G MacIntyre-Cockett,Mariateresa de Cesare,Alex Alderton,Roberto Amato,Cristina V. Ariani,Mathew A. Beale,Charlotte Beaver,Katherine L. Bellis,Emma Betteridge,James Bonfield,John Danesh,Matthew J. Dorman,Eleanor Drury,Ben Farr,Luke Foulser,Sónia Gonçalves,Scott Goodwin,Marina Gourtovaia,Ewan M. Harrison,David A. Jackson,Dorota Jamrozy,Ian Johnston,Leanne Kane,Sally Kay,Jon-Paul Keatley,Dominic P. Kwiatkowski,Cordelia Langford,Mara K. N. Lawniczak,Laura Letchford,Rich Livett,Stephanie W. Lo,Inigo Martincorena,Samantha McGuigan,Rachel Nelson,Steve Palmer,Naomi Park,Minal Patel,Liam Prestwood,Christoph Puethe,Michael A. Quail,Shavanthi Rajatileka,Carol Scott,Lesley Shirley,John Sillitoe,Michael Spencer Chapman,Scott Aj Thurston,Gerry Tonkin-Hill,Danni Weldon,Diana Rajan,Iraad Bronner,Louise Aigrain,Nicholas M Redshaw,Stefanie V Lensing,Robert Davies,Andrew Whitwham,Jennifier Liddle,Kevin Lewis,Jaime Tovar-Corona,Steven Leonard,Jillian Durham,Andrew Bassett,Shane McCarthy,Robin J Moll,Keith D. James,Karen Oliver,Alex Makunin,Jeffrey C. Barrett,Rory Gunson +607 more
TL;DR: In this paper, the authors compared the severity of the delta variant compared with the alpha variant by determining the relative risk of hospital attendance outcomes and found that outbreaks of the Delta variant in unvaccinated populations might lead to a greater burden on health-care services than the alpha variants.
Journal ArticleDOI
Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China.
Jing Lu,Louis du Plessis,Zhe Liu,Verity Hill,Min Kang,Huifang Lin,Jiufeng Sun,Sarah François,Moritz U. G. Kraemer,Nuno R. Faria,John T. McCrone,Jingju Peng,Qianlin Xiong,Runyu Yuan,Lilian Zeng,Pingping Zhou,Chumin Liang,Lina Yi,Jun Liu,Jianpeng Xiao,Jianxiong Hu,Tao Liu,Wenjun Ma,Wei Li,Juan Su,Huanying Zheng,Bo Peng,Shisong Fang,Wenzhe Su,Kuibiao Li,Ruilin Sun,Ru Bai,Xi Tang,Minfeng Liang,Josh Quick,Tie Song,Andrew Rambaut,Nicholas J. Loman,Jayna Raghwani,Oliver G. Pybus,Changwen Ke +40 more
TL;DR: Combined epidemiological and phylogenetic analyses indicate multiple independent introductions to Guangdong, although phylogenetic clustering is uncertain because of low virus genetic variation early in the pandemic.
Journal ArticleDOI
Exponential growth, high prevalence of SARS-CoV-2, and vaccine effectiveness associated with the Delta variant.
Paul Elliott,D Haw,Haowei Wang,Oliver Eales,Caroline E. Walters,Kylie E. C. Ainslie,Christina Atchison,Claudio Fronterre,Peter J. Diggle,Andrew J. Page,Alexander J. Trotter,Sophie J Prosolek,Deborah Ashby,Christl A. Donnelly,Christl A. Donnelly,Wendy S. Barclay,Graham P. Taylor,Graham S Cooke,Graham S Cooke,Graham S Cooke,Helen Ward,Helen Ward,Helen Ward,Ara Darzi,Steven Riley,Samuel Robson,Nicholas J. Loman,Thomas R. Connor,Tanya Golubchik,Rocio Martinez Nunez,Catherine Ludden,Sally Corden,Ian Johnston,David Bonsall,Colin P. Smith,Ali R Awan,Giselda Bucca,M. Estée Török,Kordo Saeed,Jacqui Prieto,David K. Jackson,William L Hamilton,Luke B Snell,Catherine Moore,Ewan M. Harrison,Sónia Gonçalves,Leigh M Jackson,Ian Goodfellow,Derek Fairley,Matthew W. Loose,Joanne Watkins,Rich Livett,S.E. Moses,Roberto Amato,Samuel M. Nicholls,Matthew J. Bull,Darren Smith,Jeffrey C. Barrett,David M. Aanensen,Martin D. Curran,Surendra Parmar,Dinesh Aggarwal,James Shepherd,Matthew Parker,Sharon Glaysher,Matthew Bashton,Anthony Underwood,Nicole Pacchiarini,Katie F. Loveson,Alessandro M Carabelli,Kate Templeton,Cordelia Langford,John Sillitoe,Thushan I de Silva,Dennis Wang,Dominic P. Kwiatkowski,Andrew Rambaut,Justin O'Grady,Simon Cottrell,Matthew T. G. Holden,E. Thomson,Husam Osman,Monique Andersson,Anoop Chauhan,Mohammed O Hassan-Ibrahim,Mara K. N. Lawniczak,Ravi Gupta,Alex Alderton,Meera Chand,Chrystala Constantinidou,Meera Unnikrishnan,Alistair C. Darby,Julian A. Hiscox,Steve Paterson,Inigo Martincorena,David Robertson,Erik M. Volz,Oliver G. Pybus,Andrew R. Bassett,Cristina V. Ariani,Michael Spencer Chapman,Kathy Li,Rajiv Shah,Natasha Jesudason,Yusri Taha,Martin P McHugh,Rebecca Dewar,Aminu S Jahun,Claire McMurray,Sarojini Pandey,James McKenna,Andrew Nelson,Gregory R Young,Clare M. McCann,Scott Elliott,Hannah Lowe,Ben Temperton,Sunando Roy,Anna Price,Sara Rey,Matthew Wyles,Stefan Rooke,Sharif Shaaban,Mariateresa de Cesare,Laura Letchford,Siona Silveira,Emanuela Pelosi,Eleri Wilson-Davies,Myra Hosmillo,Áine O'Toole,Andrew Hesketh,Richard Stark,Louis du Plessis,Christopher Ruis,Helen Adams,Yann Bourgeois,Stephen L. Michell,Dimitris Grammatopoulos,Jonathan D. Edgeworth,Judith Breuer,John A. Todd,Christophe Fraser,David Buck,Michaela John,Gemma L. Kay,Steve Palmer,Sharon J. Peacock,David Heyburn,Danni Weldon,Esther Robinson,Alan McNally,Peter Muir,Ian B Vipond,John Boyes,Venkat Sivaprakasam,Tranprit Saluja,Samir Dervisevic,Emma Meader,Naomi R Park,Karen Oliver,Aaron R. Jeffries,Sascha Ott,Ana da Silva Filipe,David Simpson,Christopher B. Williams,Jane A. H. Masoli,Bridget A. Knight,Christopher R. Jones,Cherian Koshy,Amy Ash,Anna L. Casey,Andrew Bosworth,Liz Ratcliffe,Li Xu-McCrae,Hannah M Pymont,Stephanie Hutchings,Lisa Berry,Katie Jones,Fenella D. Halstead,Thomas R. A. Davis,Christopher Holmes,Miren Iturriza-Gomara,Anita Lucaci,Paul Randell,Alison Cox,Pinglawathee Madona,Kathryn Ann Harris,Julianne R Brown,Tabitha Mahungu,Dianne Irish-Tavares,Tanzina Haque,Jennifer Hart,Eric Witele,Melisa Louise Fenton,Steven Liggett,Clive Graham,Emma Swindells,Jennifer Collins,Gary Eltringham,Sharon Campbell,Patrick C McClure,Gemma Clark,Tim J Sloan,Carl Jones,Jessica Lynch,Ben Warne,Steven Leonard,Jillian Durham,Thomas N. Williams,Sam Haldenby,Nathaniel Storey,Nabil-Fareed Alikhan,Nadine Holmes,Christopher J. Moore,Matthew Carlile,Malorie Perry,Noel Craine,Ronan A Lyons,Angela Helen Beckett,Salman Goudarzi,Christopher Fearn,Kate B. Cook,Hannah Dent,Hannah Paul,Robert Davies,Beth Blane,Sophia T Girgis,Mathew A. Beale,Katherine L. Bellis,Matthew J. Dorman,Eleanor Drury,Leanne Kane,Sally Kay,Samantha McGuigan,Rachel Nelson,Liam Prestwood,Shavanthi Rajatileka,Rahul Batra,Rachel Williams,Mark Kristiansen,Angie Green,Anita Justice,Adhyana I K Mahanama,Buddhini Samaraweera,Nazreen F. Hadjirin,Joshua Quick,Radoslaw Poplawski,Leanne M Kermack,Nicola Reynolds,Grant Hall,Yasmin Chaudhry,Malte L Pinckert,Iliana Georgana,Robin J Moll,Alicia Thornton,Richard H. Myers,Joanne D. Stockton,Charlotte A Williams,Wen C Yew,Amy Trebes,G MacIntyre-Cockett,Alec Birchley,Alexander Adams,Amy Plimmer,Bree Gatica-Wilcox,Caoimhe McKerr,Ember Hilvers,Hannah Jones,Hibo Asad,Jason Coombes,Johnathan M Evans,Laia Fina,Lauren Gilbert,Lee Graham,Michelle Cronin,Sara Kumziene-Summerhayes,S Taylor,Sophie Jones,Danielle C. Groves,Peijun Zhang,Marta Gallis,Stavroula F Louka,Igor Starinskij,Jon-Paul Keatley,Joshua B Singer,Leonardo de Oliveira Martins,Corin Yeats,Khalil Abudahab,Ben Taylor,Mirko Menegazzo,John Danesh,Wendy Hogsden,Sahar Eldirdiri,Anita Kenyon,Jenifer Mason,Trevor Robinson,Alison Holmes,James V. Price,John A Hartley,Tanya Curran,Alison E. Mather,Giri Shankar,Rachel Jones,Robin Howe,Sian Morgan,Elizabeth Wastenge,Michael R Chapman,Siddharth Mookerjee,Rachael Stanley,Wendy Smith,Tim E. A. Peto,David W Eyre,Derrick W. Crook,Gabrielle Vernet,Christine Kitchen,Huw Gulliver,Ian Merrick,Martyn Guest,Robert J. Munn,Declan Bradley,Tim Wyatt,Charlotte Beaver,Luke Foulser,Sophie Palmer,Carol Churcher,Ellena Brooks,Kim S Smith,Katerina Galai,Georgina M McManus,Frances Bolt,Francesc Coll,Lizzie Meadows,Stephen W Attwood,Alisha Davies,Elen De Lacy,Fatima Downing,Sue Edwards,Garry Scarlett,Sarah Jeremiah,Nikki Smith,Danielle Leek,Sushmita Sridhar,Sally Forrest,Claire Cormie,Harmeet K Gill,Joana Dias,Ellen Higginson,Mailis Maes,Jamie Young,Michelle Wantoch,Dorota Jamrozy,Stephanie W. Lo,Minal Patel,Verity Hill,Claire M Bewshea,Sian Ellard,Cressida Auckland,Ian Harrison,Chloe Bishop,Vicki Chalker,Alex G. Richter,Andrew D Beggs,Angus I. Best,Benita Percival,Jeremy Mirza,Oliver Megram,Megan Mayhew,Liam Crawford,Fiona Ashcroft,Emma Moles-Garcia,Nicola Cumley,Richard Hopes,Patawee Asamaphan,Marc Niebel,Rory Gunson,Amanda Bradley,Alasdair MacLean,Guy Mollett,Rachel Blacow,Paul W Bird,Thomas Helmer,Karlie Fallon,Julian Tang,Antony D Hale,Louissa R Macfarlane-Smith,Katherine L Harper,Holli Carden,Nicholas W Machin,Kathryn A Jackson,Shazaad Ahmad,Ryan P George,Lance Turtle,Elaine O'Toole,Joanne Watts,Cassie Breen,Angela Cowell,Adela Alcolea-Medina,Themoula Charalampous,Amita Patel,Lisa J Levett,Judith Heaney,Aileen G. Rowan,Graham Phillip Taylor,Divya K. Shah,Laura Atkinson,Jack Cd Lee,Adam P Westhorpe,Riaz Jannoo,Helen L Lowe,Angeliki Karamani,Leah Ensell,Wendy Chatterton,Monika Pusok,Ashok Dadrah,Amanda Symmonds,Graciela Sluga,Zoltán Molnár,Paul A. Baker,Stephen Bonner,Sarah Essex,Edward Barton,Debra Padgett,Garren Scott,Jane Greenaway,Brendan A I Payne,Shirelle Burton-Fanning,Sheila Waugh,Veena Raviprakash,Nicola Sheriff,Victoria Blakey,Lesley-Anne Williams,Jonathan W. Moore,Susanne Stonehouse,Louise Smith,Rose K Davidson,Luke Bedford,Lindsay Coupland,Victoria Wright,Joseph G. Chappell,Theocharis Tsoleridis,Jonathan K. Ball,Manjinder Khakh,Vicki M. Fleming,Michelle Lister,Hannah C. Howson-Wells,Louise Berry,Tim Boswell,Amelia Joseph,Iona Willingham,Nichola Duckworth,Sarah Walsh,Emma L. Wise,Nathan Moore,Matilde Mori,Nick Cortes,Stephen P. Kidd,Rebecca Williams Bmbs,Laura Gifford,Kelly Bicknell,Sarah Wyllie,A Lloyd,Robert Impey,Cassandra S Malone,Benjamin J Cogger,Nick Levene,Lynn Monaghan,Alexander J Keeley,David G Partridge,Mohammad Raza,Cariad Evans,Kate M. Johnson,Emma Betteridge,Ben Farr,Scott Goodwin,Michael A. Quail,Carol Scott,Lesley Shirley,Scott Aj Thurston,Diana Rajan,Iraad F. Bronner,Louise Aigrain,Nicholas M Redshaw,Stefanie V Lensing,Shane A. McCarthy,Alex Makunin,Carlos Balcazar,Michael Gallagher,Kathleen A. Williamson,Thomas D Stanton,Michelle L Michelsen,Joanna Warwick-Dugdale,Robin Manley,Audrey Farbos,James W. Harrison,Christine Sambles,David J. Studholme,Angie Lackenby,Tamyo Mbisa,Steven Platt,Shahjahan Miah,David F. Bibby,Carmen F. Manso,Jonathan Hubb,Gavin Dabrera,Mary Ramsay,Daniel Bradshaw,Ulf Schaefer,Natalie Groves,Eileen Gallagher,David N. Lee,David J. Williams,Nicholas Ellaby,Hassan Hartman,Nikos Manesis,Vineet Patel,Juan Ledesma,Katherine A Twohig,Elias Allara,Clare Pearson,Jeffrey K. J. Cheng,Hannah E Bridgewater,Lucy R. Frost,Grace Taylor-Joyce,Paul E Brown,Lily Tong,Alice Broos,Daniel Mair,Jenna Nichols,Stephen Carmichael,Katherine Smollett,Kyriaki Nomikou,Elihu Aranday-Cortes,Natasha M. Johnson,Seema Nickbakhsh,Edith Vamos,Margaret Hughes,Lucille Rainbow,Richard Eccles,Charlotte Nelson,Mark Whitehead,Richard I. Gregory,Matthew Gemmell,Claudia Wierzbicki,Hermione J. Webster,Chloe L Fisher,Adrian W Signell,Gilberto Betancor,Harry D Wilson,Gaia Nebbia,Flavia Flaviani,Alberto C Cerda,Tammy V Merrill,Rebekah E Wilson,Marius Cotic,Nadua Bayzid,Thomas G. Thompson,Erwan Acheson,Steven Rushton,Sarah J. O'Brien,David Baker,Steven Rudder,Alp Aydin,Fei Sang,Johnny Debebe,Sarah François,Tetyana I. Vasylyeva,Marina Escalera Zamudio,Bernardo Gutierrez,Angela Marchbank,Joshua Maksimovic,Karla Spellman,Kathryn McCluggage,M Morgan,Robert Beer,Safiah Afifi,Trudy Workman,William D. Fuller,Catherine Bresner,Adrienn Angyal,Luke R. Green,Paul J. Parsons,Rachel Tucker,Rebecca C H Brown,Max Whiteley,James Bonfield,Christoph Puethe,Andrew Whitwham,Jennifier Liddle,Will P. M. Rowe,Igor Siveroni,Thanh Le-Viet,Amy Gaskin,Robert E. Johnson +592 more
TL;DR: In this article, the authors assessed RT-PCR swab-positivity in the REAL-time Assessment of Community Transmissibility (RACT) in many countries associated with the Delta variant.
Journal ArticleDOI
Discovery of parvovirus-related sequences in an unexpected broad range of animals.
Sarah François,Denis Filloux,Philippe Roumagnac,Diane Bigot,Philippe Gayral,Philippe Gayral,Darren P. Martin,Rémi Froissart,Rémi Froissart,Mylène Ogliastro +9 more
TL;DR: The number ofParvoviral sequences discovered within public databases revealed numerous previously unknown parvovirus-host combinations; particularly in invertebrates, suggesting that the host-ranges of extant parvvoviruses might span the entire animal kingdom.
Posted ContentDOI
Genomic epidemiology of SARS-CoV-2 in Guangdong Province, China
Jing Lu,Louis du Plessis,Zhe Liu,Verity Hill,Min Kang,Huifang Lin,Jiufeng Sun,Sarah François,Moritz U. G. Kraemer,Nuno R. Faria,John T. McCrone,Jingju Peng,Qianlin Xiong,Runyu Yuan,Lilian Zeng,Pingping Zhou,Chumin Liang,Lina Yi,Jun Liu,Jianpeng Xiao,Jianxiong Hu,Tao Liu,Wenjun Ma,Wei Li,Juan Su,Huanying Zheng,Bo Peng,Shisong Fang,Wenzhe Su,Kuibiao Li,Ruilin Sun,Ru Bai,Xi Tang,Minfeng Liang,Josh Quick,Tie Song,Andrew Rambaut,Nicholas J. Loman,Jayna Raghwani,Oliver G. Pybus,Changwen Ke +40 more
TL;DR: Combined epidemiological and phylogenetic analyses indicate multiple independent introductions to Guangdong, although phylogenetic clustering is uncertain due to low virus genetic variation early in the pandemic.