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Ira W. Deveson
Researcher at Garvan Institute of Medical Research
Publications - 69
Citations - 1631
Ira W. Deveson is an academic researcher from Garvan Institute of Medical Research. The author has contributed to research in topics: Biology & Medicine. The author has an hindex of 13, co-authored 44 publications receiving 825 citations. Previous affiliations of Ira W. Deveson include Australian National University & University of New South Wales.
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Journal ArticleDOI
Reference standards for next-generation sequencing.
TL;DR: The informed use of reference standards, and associated statistical principles, ensures rigorous analysis of NGS data and is essential for its future clinical use.
Journal ArticleDOI
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis.
Rowena A. Bull,Thiruni N. Adikari,James Ferguson,Jillian M. Hammond,Igor Stevanovski,Alicia G. Beukers,Zin Naing,Zin Naing,Malinna Yeang,Malinna Yeang,Andrey Verich,Hasindu Gamaarachchi,Hasindu Gamaarachchi,Ki Wook Kim,Ki Wook Kim,Fabio Luciani,Sacha Stelzer-Braid,Sacha Stelzer-Braid,John-Sebastian Eden,William D. Rawlinson,Sebastiaan J. van Hal,Sebastiaan J. van Hal,Ira W. Deveson,Ira W. Deveson +23 more
TL;DR: A systematic evaluation of analytical performance for SARS-CoV-2 WGS will facilitate widespread adoption of ONT sequencing within local, national and international COVID-19 public health initiatives.
Journal ArticleDOI
The Dimensions, Dynamics, and Relevance of the Mammalian Noncoding Transcriptome
Ira W. Deveson,Simon A. Hardwick,Tim R. Mercer,Tim R. Mercer,John S. Mattick,John S. Mattick +5 more
TL;DR: The key studies and technological advances that have shaped the understanding of the dimensions, dynamics, and biological relevance of the mammalian noncoding transcriptome are described.
Journal ArticleDOI
Spliced synthetic genes as internal controls in RNA sequencing experiments
Simon A. Hardwick,Simon A. Hardwick,Wendy Y. Chen,Wendy Y. Chen,Ted Wong,Ira W. Deveson,Ira W. Deveson,James Blackburn,James Blackburn,Stacey B. Andersen,Lars K. Nielsen,John S. Mattick,John S. Mattick,Tim R. Mercer,Tim R. Mercer +14 more
TL;DR: A set of spike-in RNA standards, termed 'sequins' (sequencing spike-ins), that represent full-length spliced mRNA isoforms, that provide a qualitative and quantitative reference with which to navigate the complexity of the human transcriptome are developed.
Journal ArticleDOI
Diagnosis of fusion genes using targeted RNA sequencing
Erin E. Heyer,Ira W. Deveson,Ira W. Deveson,Danson Wooi,Danson Wooi,Christina I. Selinger,Ruth J. Lyons,Vanessa M. Hayes,Sandra A O'Toole,Mandy L. Ballinger,Devinder Gill,David Thomas,Tim R. Mercer,Tim R. Mercer,James Blackburn,James Blackburn +15 more
TL;DR: It is demonstrated that targeted RNA sequencing provides fast, sensitive and quantitative gene fusion detection and overcomes the limitations of approaches currently in clinical use.