J
Jackson Wells
Researcher at Oregon State University
Publications - 4
Citations - 108
Jackson Wells is an academic researcher from Oregon State University. The author has contributed to research in topics: Genome & Humulus lupulus. The author has an hindex of 3, co-authored 4 publications receiving 55 citations.
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Journal ArticleDOI
Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest
Michael E. Sparks,Raman Bansal,Joshua B. Benoit,Michael B. Blackburn,Hsu Chao,Mengyao Chen,Sammy Cheng,Christopher P. Childers,Huyen Dinh,Harshavardhan Doddapaneni,Shannon Dugan,Elena N. Elpidina,David W. Farrow,Markus Friedrich,Richard A. Gibbs,Brantley Hall,Yi Han,Richard W. Hardy,Christopher J. Holmes,Daniel S.T. Hughes,Panagiotis Ioannidis,Panagiotis Ioannidis,Alys M. Cheatle Jarvela,J. Spencer Johnston,Jeffery W. Jones,Brent A. Kronmiller,Faith Kung,Sandra L. Lee,Alexander G. Martynov,Patrick Masterson,Florian Maumus,Monica Munoz-Torres,Shwetha C. Murali,Terence Murphy,Donna M. Muzny,David R. Nelson,Brenda Oppert,Kristen A. Panfilio,Kristen A. Panfilio,Débora P. Paula,Leslie Pick,Monica F. Poelchau,Jiaxin Qu,Katie Reding,Joshua H. Rhoades,Adelaide C. Rhodes,Stephen Richards,Stephen Richards,Rose Richter,Hugh M. Robertson,Andrew J. Rosendale,Zhijian Jake Tu,Arun S. Velamuri,Robert M. Waterhouse,Matthew T. Weirauch,Matthew T. Weirauch,Jackson Wells,John H. Werren,Kim C. Worley,Evgeny M. Zdobnov,Dawn E. Gundersen-Rindal +60 more
TL;DR: Analysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys’ capacity for invasiveness.
Journal ArticleDOI
A draft phased assembly of the diploid Cascade hop (Humulus lupulus) genome.
Lillian K. Padgitt-Cobb,Sarah B. Kingan,Jackson Wells,Justin Elser,Brent A. Kronmiller,Daniel Moore,Gregory T. Concepcion,Paul Peluso,David R. Rank,Pankaj Jaiswal,John A. Henning,David A. Hendrix +11 more
TL;DR: In this paper, a draft haplotype-phased assembly of the Cascade cultivar genome is presented, which is the most extensive representation of the hop genome to date and provides insight into selective pressures that have driven evolution in hop.
Posted ContentDOI
A phased, diploid assembly of the Cascade hop (Humulus lupulus) genome reveals patterns of selection and haplotype variation
Lillian K. Padgitt-Cobb,Sarah B. Kingan,Jackson Wells,Justin Elser,Brent A. Kronmiller,Daniel Moore,Gregory T. Concepcion,Paul Peluso,David R. Rank,Pankaj Jaiswal,John A. Henning,David A. Hendrix +11 more
TL;DR: The approaches developed to analyze a phased, diploid assembly of a large plant genome serve to deepen the understanding of the genomic landscape of hop and may have broader applicability to the study of other large, complex genomes.
Journal ArticleDOI
Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis
Amita Kashyap,Adelaide C. Rhodes,Brent A. Kronmiller,Josie Berger,Ashley Champagne,Edward W. Davis,Mitchell V. Finnegan,Matthew Geniza,David A. Hendrix,Christiane V. Löhr,Vanessa M. Petro,Thomas J. Sharpton,Jackson Wells,Clinton W. Epps,Pankaj Jaiswal,Brett M. Tyler,Stephen A. Ramsey +16 more
TL;DR: The objective of this study was to discover and profile polyadenylated lncRNAs in the beaver using high-throughput short-read sequencing of RNA from sixteen beaver tissues and to annotate the resulting lNCRNAs based on their potential for orthology with known lnc RNAs in other species.