J
Javier F. Tabima
Researcher at Oregon State University
Publications - 58
Citations - 2996
Javier F. Tabima is an academic researcher from Oregon State University. The author has contributed to research in topics: Population & Phytophthora. The author has an hindex of 15, co-authored 51 publications receiving 2094 citations. Previous affiliations of Javier F. Tabima include United States Department of Agriculture & Agricultural Research Service.
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Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction.
TL;DR: The R package poppr is developed providing unique tools for analysis of data from admixed, clonal, mixed, and/or sexual populations, and functions for genotypic diversity and clone censoring are specific for clonal populations.
Journal ArticleDOI
The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes
Erica M. Goss,Javier F. Tabima,David E. L. Cooke,Silvia Restrepo,William E. Fry,Gregory A. Forbes,Valerie J. Fieland,Martha Cárdenas,Niklaus J. Grünwald +8 more
TL;DR: The hypothesis that populations found in the Andes are descendants of the Mexican populations and reconcile previous findings of ancestral variation in theAndes is supported, as well as the harnessing of plant disease resistance to manage late blight.
Posted ContentDOI
Poppr: an R package for genetic analysis of populations with clonal or partially clonal reproduction
TL;DR: The R package poppr is developed, providing unique tools for analysis of data from admixed, clonal, and/or mixed populations, and can be used for dominant/codominant and haploid/diploid genetic data.
Journal ArticleDOI
Five new species of entomopathogenic fungi from the Amazon and evolution of neotropical Ophiocordyceps
Tatiana Sanjuan,Tatiana Sanjuan,Ana E. Franco-Molano,Ryan M. Kepler,Joseph W. Spatafora,Javier F. Tabima,Aída M. Vasco-Palacios,Silvia Restrepo +7 more
TL;DR: It is concluded that host identity and host habitat are positively correlated with phylogenetic species of Ophiocordyceps and are probably strong drivers for speciation of neotropical entomopathogenic fungi.
Journal ArticleDOI
Phylogeography and molecular epidemiology of Papaya ringspot virus
X.A. Olarte Castillo,Gustavo Fermin,Javier F. Tabima,Y. Rojas,Paula F. Tennant,Marc Fuchs,Roberto Sierra,Adriana Bernal,Silvia Restrepo +8 more
TL;DR: The results confirm previous estimates on the origin of PRSV around 400 years ago and suggest distinct dispersion events from the Indian Peninsula to the rest of Asia, via Thailand, and subsequently to the Americas.