N
Nicolai Krogh
Researcher at University of Copenhagen
Publications - 28
Citations - 807
Nicolai Krogh is an academic researcher from University of Copenhagen. The author has contributed to research in topics: RNA & Ribosomal RNA. The author has an hindex of 10, co-authored 25 publications receiving 522 citations.
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Journal ArticleDOI
Profiling of 2′-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity
Nicolai Krogh,Martin D. Jansson,Sophia Häfner,Disa Tehler,Ulf Birkedal,Mikkel Christensen-Dalsgaard,Anders H. Lund,Henrik Nielsen +7 more
TL;DR: This study constitutes the first comprehensive mapping of 2′-O-Me sites in human rRNA using a high throughput sequencing approach and establishes the existence of a core of constitutively methylated positions and a subset of variable, potentially regulatory positions, and paves the way for experimental analyses of the role of variations in rRNA methylation under different physiological or pathological settings.
Journal ArticleDOI
Profiling of Ribose Methylations in RNA by High‐Throughput Sequencing
Ulf Birkedal,Mikkel Christensen-Dalsgaard,Nicolai Krogh,Radhakrishnan Sabarinathan,Jan Gorodkin,Henrik Nielsen +5 more
TL;DR: A sequencing-based method (RiboMeth-seq) and its application to yeast ribosomes, presently the best-studied eukaryotic model system, enables a detailed evaluation of the importance of RNA modifications in the cells most sophisticated molecular machine.
Journal ArticleDOI
ZAKα Recognizes Stalled Ribosomes through Partially Redundant Sensor Domains.
Anna Vind,Goda Snieckute,Melanie Blasius,Christopher Tiedje,Nicolai Krogh,Dorte B. Bekker-Jensen,Kasper L. Andersen,Cathrine Nordgaard,Maxim A. X. Tollenaere,Anders H. Lund,Jesper V. Olsen,Henrik Nielsen,Simon Bekker-Jensen +12 more
TL;DR: It is shown that the long isoform of ZAK (ZAKα) directly associates with ribosomes by inserting its flexible C terminus into the ribosomal intersubunit space, and that ablation of the RSR response leads to organismal phenotypes and decreased lifespan in the nematode Caenorhabditis elegans.
Journal ArticleDOI
Developmental changes of rRNA ribose methylations in the mouse.
TL;DR: This work provides the first evidence for ribosome heterogeneity at the level of rRNA modifications during mouse development using a sequencing-based profiling method for ribose methylations.
Journal ArticleDOI
SIRT7-Dependent Deacetylation of Fibrillarin Controls Histone H2A Methylation and rRNA Synthesis during the Cell Cycle.
Aishwarya Iyer-Bierhoff,Nicolai Krogh,Peter Tessarz,Thomas Ruppert,Henrik Nielsen,Ingrid Grummt +5 more
TL;DR: The results reveal that SIRT7-dependent deacetylation impacts nucleolar activity by an FBL-driven circuitry that mediates cell-cycle-dependent fluctuation of rDNA transcription.