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Niek Dekker

Researcher at AstraZeneca

Publications -  74
Citations -  4409

Niek Dekker is an academic researcher from AstraZeneca. The author has contributed to research in topics: Active site & Bacterial outer membrane. The author has an hindex of 30, co-authored 69 publications receiving 3788 citations. Previous affiliations of Niek Dekker include Utrecht University.

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Thermofluor-based high-throughput stability optimization of proteins for structural studies.

TL;DR: A twofold increase in the number of crystallization leads was observed when the proteins were cocrystallized with stabilizing additives as compared with experiments without these additives, suggesting that thermofluor constitutes an efficient generic high-throughput method for identification of protein properties predictive of crystallizability.
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Crystal structure of the outer membrane protease OmpT from Escherichia coli suggests a novel catalytic site.

TL;DR: The crystal structure of OmpT from Escherichia coli is presented, which shows a 10‐stranded antiparallel β‐barrel that protrudes far from the lipid bilayer into the extracellular space and a novel proteolytic mechanism, involving a His-Asp dyad and an Asp—Asp couple that activate a putative nucleophilic water molecule.
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Structural evidence for dimerization-regulated activation of an integral membrane phospholipase.

TL;DR: X-ray structures of monomeric and dimeric OMPLA from E. coli provide a detailed view of activation by dimerization of a membrane protein.
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G-protein coupled receptor solubilization and purification for biophysical analysis and functional studies, in the total absence of detergent

TL;DR: The first solubilization and purification of a functional GPCR [human adenosine A2A receptor (A2AR)], in the total absence of detergent at any stage, is reported, by exploiting spontaneous encapsulation by styrene maleic acid co-polymer direct from the membrane into a nanoscale SMA lipid particle (SMALP).