P
Philip E. Bourne
Researcher at University of Virginia
Publications - 357
Citations - 64294
Philip E. Bourne is an academic researcher from University of Virginia. The author has contributed to research in topics: Protein Data Bank & Structural genomics. The author has an hindex of 68, co-authored 331 publications receiving 54563 citations. Previous affiliations of Philip E. Bourne include University of Sheffield & University of California, Los Angeles.
Papers
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Journal ArticleDOI
Protein structures: From famine to feast
Journal ArticleDOI
Cobweb: a Java applet for network exploration and visualisation
TL;DR: Cobweb is a Java applet for real-time network visualization that allows new nodes to be interactively added to a network by querying a database on a server.
Proceedings ArticleDOI
The status of structural genomics defined through the analysis of current targets and structures.
Philip E. Bourne,C. K. J. Allerston,Werner G. Krebs,Wilfred W. Li,Ilya N. Shindyalov,Adam Godzik,Iddo Friedberg,Tong Liu,David L. Wild,Seungwoo Hwang,Zoubin Ghahramani,Li Chen,John D. Westbrook +12 more
TL;DR: This analysis focused on temporal characteristics and target characteristics of the proteins targeted by structural genomics and how biased is the target set when compared to the PDB and to predictions across complete genomes.
Journal ArticleDOI
A case study of high-throughput biological data processing on parallel platforms
TL;DR: A generalized approach to this analysis, but present specific results using the program CEPAR, an efficient implementation of the Combinatorial Extension algorithm in a massively parallel (PAR) mode for finding pairwise protein structure similarities and aligning protein structures from the Protein Data Bank.
Journal ArticleDOI
Integration of open access literature into the RCSB Protein Data Bank using BioLit.
Andreas Prlić,Marco A Martinez,Dimitris Dimitropoulos,Bojan Beran,Benjamin T. Yukich,Peter W. Rose,Philip E. Bourne,Philip E. Bourne,J. Lynn Fink +8 more
TL;DR: The integration between literature and websites, as demonstrated here with the RCSB PDB, provides a broader view for how a given structure has been analyzed and used, and speaks to the opportunities afforded by open and free access to both database and literature content.