R
Roberto Marabini
Researcher at Autonomous University of Madrid
Publications - 111
Citations - 5157
Roberto Marabini is an academic researcher from Autonomous University of Madrid. The author has contributed to research in topics: Image processing & Iterative reconstruction. The author has an hindex of 29, co-authored 107 publications receiving 4351 citations. Previous affiliations of Roberto Marabini include University of Pennsylvania & City University of New York.
Papers
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Journal ArticleDOI
XMIPP: a new generation of an open-source image processing package for electron microscopy
Carlos Oscar S. Sorzano,Roberto Marabini,Javier Velázquez-Muriel,J.R. Bilbao-Castro,Sjors H.W. Scheres,José María Carazo,Alberto Pascual-Montano +6 more
TL;DR: A general overview of a new generation of Xmipp that has been re-engineered to maximize flexibility and modularity, potentially facilitating its integration in future standardization efforts in the field.
Journal ArticleDOI
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy.
J.M. de la Rosa-Trevín,A. Quintana,L. del Cano,A. Zaldívar,I. Foche,J. Gutiérrez,Josué Gómez-Blanco,Jordi Burguet-Castell,J. Cuenca-Alba,Vahid Abrishami,Javier Vargas,Joaquín Otón,Grigory Sharov,José Luis Vilas,J. Navas,P. Conesa,Mohsen Kazemi,Roberto Marabini,Carlos Oscar S. Sorzano,Carlos Oscar S. Sorzano,José María Carazo +20 more
TL;DR: Scipion is a software framework for integrating several 3DEM software packages through a workflow-based approach that allows the execution of reusable, standardized, traceable and reproducible image-processing protocols.
Journal ArticleDOI
Image processing for electron microscopy single-particle analysis using XMIPP
Sjors H.W. Scheres,Rafael Núñez-Ramírez,Carlos Oscar S. Sorzano,José María Carazo,Roberto Marabini +4 more
TL;DR: A collection of standardized image processing protocols for electron microscopy single-particle analysis using the XMIPP software package that allows performing the entire processing workflow starting from digitized micrographs up to the final refinement and evaluation of 3D models.
Book ChapterDOI
Consistent and elastic registration of histological sections using vector-spline regularization
Ignacio Arganda-Carreras,Carlos Oscar S. Sorzano,Roberto Marabini,José María Carazo,Carlos Ortiz-de-Solorzano,Jan Kybic +5 more
TL;DR: A new image registration algorithm for the alignment of histological sections that combines the ideas of B-spline based elastic registration and consistent image registration, to allow simultaneous registration of images in two directions (direct and inverse).
Journal ArticleDOI
Maximum-likelihood Multi-reference Refinement for Electron Microscopy Images
Sjors H.W. Scheres,Mikel Valle,Rafael López Núñez,Carlos Oscar S. Sorzano,Carlos Oscar S. Sorzano,Roberto Marabini,Gabor T. Herman,José María Carazo,José María Carazo +8 more
TL;DR: Application of the maximum-likelihood approach to multi-reference image refinement to a cryo-electron microscopy dataset revealed two major classes for projections of simian virus 40 large T-antigen in complex with an asymmetric DNA-probe, containing the origin of simIAN virus 40 replication.