S
Sudarshan Narasimhan
Researcher at SRA International
Publications - 3
Citations - 1614
Sudarshan Narasimhan is an academic researcher from SRA International. The author has contributed to research in topics: Complementary DNA & cDNA library. The author has an hindex of 3, co-authored 3 publications receiving 1601 citations.
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Journal ArticleDOI
GoMiner: a resource for biological interpretation of genomic and proteomic data
Barry R. Zeeberg,Weimin Feng,Geoffrey D. Wang,May D. Wang,Anthony T. Fojo,Margot Sunshine,Sudarshan Narasimhan,David W. Kane,William C. Reinhold,Samir Lababidi,Kimberly J. Bussey,Joseph Riss,J. Carl Barrett,John N. Weinstein +13 more
TL;DR: GoMiner, a program package that organizes lists of 'interesting' genes for biological interpretation in the context of the Gene Ontology, provides quantitative and statistical output files and two useful visualizations.
Journal ArticleDOI
High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)
Barry R. Zeeberg,Haiying Qin,Sudarshan Narasimhan,Margot Sunshine,Hong Cao,David W. Kane,Mark Reimers,Robert M. Stephens,David Bryant,Stanley K. Burt,Eldad Elnekave,Danielle M. Hari,Thomas A. Wynn,Charlotte Cunningham-Rundles,Donn M. Stewart,David E. Nelson,John N. Weinstein +16 more
TL;DR: High-Throughput GoMiner achieves the desired goal of providing a computational resource that automates the analysis of multiple microarrays and then integrates the results across all of them in useful exportable output files and visualizations.
Journal ArticleDOI
Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling
Ryan D. Morin,Elbert Chang,Anca Petrescu,Nancy Y. Liao,Malachi Griffith,Robert Kirkpatrick,Yaron S.N. Butterfield,Alice C. Young,Jeffrey L Stott,Sarah Barber,Ryan Babakaiff,Mark Dickson,Corey Matsuo,David H. W. Wong,George S. Yang,Duane E. Smailus,Keith Wetherby,Peggy N. Kwong,Jane Grimwood,Charles P. Brinkley,Mabel Brown-John,Natalie D. Reddix-Dugue,Michael Mayo,Jeremy Schmutz,Jaclyn Beland,Morgan Park,Susan Gibson,Teika Olson,Gerard G. Bouffard,Miranda Tsai,Ruth Featherstone,Steve Chand,Asim Sarosh Siddiqui,Wonhee Jang,Edward B. Lee,Steven L. Klein,Robert W. Blakesley,Barry R. Zeeberg,Sudarshan Narasimhan,John N. Weinstein,Christa Pennacchio,Richard M. Myers,Eric D. Green,Lukas Wagner,Daniela S. Gerhard,Marco A. Marra,Steven J.M. Jones,Robert A. Holt +47 more
TL;DR: It is found that the paralogs that have been lost since the tetraploidization event are enriched for several molecular functions, but have found no such enrichment in the extantParalogs.